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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
38.7
nTPM
Monaco:
97.4
nTPM
Schmiedel:
222.3
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
38.7
HPA sample
nTPM
gdT-cell nTPM: 30.8
Samples: 6
Max nTPM: 36.5
Min nTPM: 24.2
P10809_1007
36.5
P10809_1022
36.5
P10809_1041
29.7
P10809_1060
24.2
P10809_1077
32.0
P10809_1098
25.6
MAIT T-cell nTPM: 38.7
Samples: 6
Max nTPM: 48.2
Min nTPM: 29.4
P10809_1006
40.3
P10809_1024
48.2
P10809_1043
29.4
P10809_1062
32.9
P10809_1083
36.6
P10809_1097
45.0
Memory CD4 T-cell nTPM: 33.4
Samples: 6
Max nTPM: 36.5
Min nTPM: 28.4
P10809_1014
35.5
P10809_1026
28.4
P10809_1045
36.5
P10809_1064
32.3
P10809_1086
36.1
P10809_1113
31.6
Memory CD8 T-cell nTPM: 32.3
Samples: 5
Max nTPM: 39.2
Min nTPM: 18.4
P10809_1012
32.3
P10809_1027
34.3
P10809_1046
39.2
P10809_1065
37.2
P10809_1111
18.4
Naive CD4 T-cell nTPM: 30.7
Samples: 6
Max nTPM: 40.6
Min nTPM: 22.3
P10809_1015
40.6
P10809_1030
31.7
P10809_1049
28.5
P10809_1068
22.3
P10809_1085
33.8
P10809_1112
27.4
Naive CD8 T-cell nTPM: 33.7
Samples: 6
Max nTPM: 38.0
Min nTPM: 30.4
P10809_1016
36.2
P10809_1031
38.0
P10809_1050
31.8
P10809_1069
34.9
P10809_1087
30.4
P10809_1110
31.1
T-reg nTPM: 35.0
Samples: 6
Max nTPM: 46.2
Min nTPM: 30.2
P10809_1018
34.5
P10809_1037
46.2
P10809_1056
30.2
P10809_1075
30.2
P10809_1094
38.3
P10809_1106
30.3
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
97.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 75.1
Samples: 4
Max nTPM: 98.8
Min nTPM: 50.1
RHH5202_R3573
98.8
RHH5230_R3602
50.1
RHH5259_R3631
54.6
RHH5288_R3660
96.7
Effector memory CD8 T-cell nTPM: 76.0
Samples: 4
Max nTPM: 105.1
Min nTPM: 48.1
RHH5203_R3574
105.1
RHH5231_R3603
89.8
RHH5260_R3632
48.1
RHH5289_R3661
60.9
MAIT T-cell nTPM: 91.7
Samples: 4
Max nTPM: 100.9
Min nTPM: 71.4
RHH5233_R3605
100.9
RHH5205_R3576
97.1
RHH5262_R3634
71.4
RHH5297_R3663
97.2
Memory CD4 T-cell TFH nTPM: 84.2
Samples: 4
Max nTPM: 104.6
Min nTPM: 71.9
RHH5300_R3666
71.9
RHH5236_R3608
81.5
RHH5265_R3637
78.9
RHH5208_R3579
104.6
Memory CD4 T-cell Th1 nTPM: 82.3
Samples: 4
Max nTPM: 103.1
Min nTPM: 60.9
RHH5210_R3581
103.1
RHH5302_R3668
99.7
RHH5238_R3610
60.9
RHH5267_R3639
65.3
Memory CD4 T-cell Th1/Th17 nTPM: 83.3
Samples: 4
Max nTPM: 126.0
Min nTPM: 52.6
RHH5303_R3669
89.6
RHH5211_R3582
126.0
RHH5239_R3611
65.1
RHH5268_R3640
52.6
Memory CD4 T-cell Th17 nTPM: 68.2
Samples: 4
Max nTPM: 77.7
Min nTPM: 63.7
RHH5304_R3670
63.7
RHH5212_R3583
77.7
RHH5240_R3612
64.4
RHH5269_R3641
66.9
Memory CD4 T-cell Th2 nTPM: 92.9
Samples: 4
Max nTPM: 107.2
Min nTPM: 74.3
RHH5305_R3671
99.1
RHH5213_R3584
90.8
RHH5241_R3613
107.2
RHH5270_R3642
74.3
Naive CD4 T-cell nTPM: 76.3
Samples: 4
Max nTPM: 82.1
Min nTPM: 67.6
RHH5306_R3672
82.1
RHH5214_R3585
67.6
RHH5242_R3614
76.1
RHH5271_R3643
79.2
Naive CD8 T-cell nTPM: 80.4
Samples: 4
Max nTPM: 104.6
Min nTPM: 50.4
RHH5201_R3572
104.6
RHH5229_R3601
50.4
RHH5258_R3630
76.8
RHH5287_R3659
89.9
Non-Vd2 gdTCR nTPM: 91.5
Samples: 4
Max nTPM: 111.2
Min nTPM: 82.4
RHH5235_R3607
83.8
RHH5264_R3636
88.7
RHH5207_R3578
111.2
RHH5299_R3665
82.4
T-reg nTPM: 63.5
Samples: 4
Max nTPM: 73.5
Min nTPM: 52.2
RHH5301_R3667
73.5
RHH5237_R3609
60.8
RHH5266_R3638
52.2
RHH5209_R3580
67.4
Terminal effector memory CD4 T-cell nTPM: 82.3
Samples: 2
Max nTPM: 82.7
Min nTPM: 81.8
RHH5243_R3615
81.8
RHH5272_R3644
82.7
Terminal effector memory CD8 T-cell nTPM: 86.6
Samples: 4
Max nTPM: 105.9
Min nTPM: 50.2
RHH5232_R3604
105.9
RHH5204_R3575
103.3
RHH5261_R3633
50.2
RHH5296_R3662
86.8
Vd2 gdTCR nTPM: 97.4
Samples: 4
Max nTPM: 111.5
Min nTPM: 71.9
RHH5234_R3606
111.5
RHH5206_R3577
107.8
RHH5263_R3635
71.9
RHH5298_R3664
98.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
