HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:17.2 nTPM
HPA Brain:40.4 nTPM
GTEx:17.2 nTPM
FANTOM5:36.9 Scaled Tags Per Million
Pig:55.2 nTPM
Mouse:63.0 nTPM
Allen mouse:6.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA038981
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 40.4
Sample id Sample description nTPM
Hippocampus
nTPM: 37.1
2621 Female, age 67, right hemisphere 43.2
2529 Female, age 94, left hemisphere 37.5
1855 Male, age 76, left hemisphere 37.3
2148 Female, age 91, left hemisphere 36.4
1911 Female, age 85, right hemisphere 36.0
1898 Male, age 80, left hemisphere 31.9
Dentate gyrus
nTPM: 33.8
2531 Female, age 67, both hemispheres 37.3
1927 Female, age 91, both hemispheres 35.4
2530 Female, age 94, left hemisphere 34.9
2246 Female, age 85, both hemispheres 33.8
2010 Male, age 76, both hemispheres 30.9
2528 Male, age 74, both hemispheres 30.3
Entorhinal gyrus
nTPM: 40.0
2613 Female, age 94, left hemisphere 51.1
2686 Male, age 75, right hemisphere 43.2
1787 Male, age 76, left hemisphere 38.9
2764 Male, age 80, right hemisphere 37.7
1938 Female, age 85, left hemisphere 34.6
2117 Female, age 91, right hemisphere 34.6
Hippocampus, CA1
nTPM: 32.4
2082 Female, age 91, right hemisphere 35.7
1873 Female, age 85, both hemispheres 33.8
2749 Male, age 80, left hemisphere 33.6
2527 Male, age 74, both hemispheres 32.9
2045 Male, age 76, both hemispheres 26.1
Hippocampus, CA2
nTPM: 34.3
1892 Male, age 76, both hemispheres 37.7
2437 Female, age 94, left hemisphere 36.8
2113 Female, age 91, right hemisphere 36.4
1963 Male, age 80, left hemisphere 35.1
1940 Female, age 85, left hemisphere 33.5
2249 Male, age 74, both hemispheres 26.3
Hippocampus, CA3
nTPM: 38.0
2861 Female, age 67, both hemispheres 54.4
2620 Female, age 94, left hemisphere 46.1
2137 Male, age 80, left hemisphere 36.1
1891 Female, age 85, both hemispheres 31.1
1867 Male, age 76, both hemispheres 30.9
2436 Male, age 74, both hemispheres 29.0
Parahippocampal cortex
nTPM: 40.4
2622 Female, age 67, right hemisphere 55.1
2693 Female, age 94, both hemispheres 42.5
2245 Female, age 91, both hemispheres 41.7
2532 Female, age 72, left hemisphere 40.7
2692 Male, age 74, both hemispheres 39.6
2250 Female, age 67, right hemisphere 38.0
1990 Female, age 91, right hemisphere 37.1
1933 Female, age 85, both hemispheres 37.0
2018 Male, age 76, both hemispheres 36.6
1850 Male, age 80, both hemispheres 35.3
Perirhinal gyrus
nTPM: 37.5
1847 Female, age 91, left hemisphere 39.3
1794 Male, age 80, right hemisphere 37.7
1841 Female, age 85, right hemisphere 37.2
2848 Male, age 76, right hemisphere 36.9
2521 Female, age 94, right hemisphere 36.4
Subiculum
nTPM: 34.1
2619 Male, age 74, both hemispheres 40.2
2438 Female, age 94, left hemisphere 34.2
2042 Male, age 76, both hemispheres 33.8
1977 Female, age 85, both hemispheres 33.4
1901 Male, age 80, both hemispheres 32.3
2729 Female, age 91, right hemisphere 30.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 17.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 17.2
Samples: 197

Max nTPM: 33.0
Min nTPM: 7.3
Std nTPM: 4.5
Median nTPM: 16.6
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 33.0
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 32.8
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 32.2
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 30.7
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 30.3
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 29.8
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 29.1
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 27.7
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 27.4
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 27.1
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 26.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 36.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 36.9
FF:10153-102I9 76 years, female 47.8
FF:10169-103B7 60 years, female 25.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 55.2
Pig sample Sample description nTPM
Subiculum
nTPM: 52.4
Samples: 4

Max nTPM: 70.6
Min nTPM: 42.2
Sample A Female 70.6
Sample B Female 48.4
Sample C Male 48.5
Sample D Male 42.2
Dorsal hippocampus
nTPM: 36.6
Samples: 4

Max nTPM: 40.4
Min nTPM: 30.6
Sample A Female 40.4
Sample B Female 36.9
Sample C Male 38.4
Sample D Male 30.6
Entorhinal cortex
nTPM: 55.2
Samples: 4

Max nTPM: 61.0
Min nTPM: 45.2
Sample A Female 61.0
Sample B Female 45.2
Sample C Male 60.1
Sample D Male 54.4
Ventral hippocampus
nTPM: 40.4
Samples: 4

Max nTPM: 51.6
Min nTPM: 34.3
Sample A Female 37.9
Sample B Female 34.3
Sample C Male 51.6
Sample D Male 37.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 63.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 63.0
Samples: 4

Max nTPM: 71.9
Min nTPM: 54.8
Sample A Male 61.7
Sample B Male 63.4
Sample C Female 54.8
Sample D Female 71.9
Hippocampal formation
nTPM: 57.2
Samples: 4

Max nTPM: 61.0
Min nTPM: 52.6
Sample A Male 52.6
Sample B Male 58.3
Sample C Female 61.0
Sample D Female 56.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.4
378545 Antisense, RP_040625_01_A10, Mouse strain C57BL/6J (56 days, male) 6.4

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