HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:30.1 nTPM
HPA Brain:46.2 nTPM
GTEx:30.1 nTPM
FANTOM5:4.2 Scaled Tags Per Million
Pig:15.5 nTPM
Mouse:43.0 nTPM
Allen mouse:0.2 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 46.2
Sample id Sample description nTPM
Hippocampus
nTPM: 39.1
1855 Male, age 76, left hemisphere 45.5
1898 Male, age 80, left hemisphere 44.4
2148 Female, age 91, left hemisphere 39.3
2621 Female, age 67, right hemisphere 36.5
1911 Female, age 85, right hemisphere 35.1
2529 Female, age 94, left hemisphere 34.1
Dentate gyrus
nTPM: 39.5
2010 Male, age 76, both hemispheres 44.3
1927 Female, age 91, both hemispheres 42.3
2246 Female, age 85, both hemispheres 38.0
2528 Male, age 74, both hemispheres 37.9
2530 Female, age 94, left hemisphere 37.2
2531 Female, age 67, both hemispheres 37.0
Entorhinal gyrus
nTPM: 40.6
1938 Female, age 85, left hemisphere 44.9
2764 Male, age 80, right hemisphere 43.2
1787 Male, age 76, left hemisphere 43.1
2613 Female, age 94, left hemisphere 39.4
2117 Female, age 91, right hemisphere 36.5
2686 Male, age 75, right hemisphere 36.3
Hippocampus, CA1
nTPM: 42.5
2749 Male, age 80, left hemisphere 51.2
2045 Male, age 76, both hemispheres 46.1
1873 Female, age 85, both hemispheres 43.7
2082 Female, age 91, right hemisphere 36.4
2527 Male, age 74, both hemispheres 35.4
Hippocampus, CA2
nTPM: 40.3
1892 Male, age 76, both hemispheres 47.5
1963 Male, age 80, left hemisphere 43.9
1940 Female, age 85, left hemisphere 38.8
2249 Male, age 74, both hemispheres 38.0
2113 Female, age 91, right hemisphere 37.6
2437 Female, age 94, left hemisphere 36.3
Hippocampus, CA3
nTPM: 40.6
2137 Male, age 80, left hemisphere 46.9
1867 Male, age 76, both hemispheres 42.4
2620 Female, age 94, left hemisphere 39.8
2861 Female, age 67, both hemispheres 39.4
1891 Female, age 85, both hemispheres 38.0
2436 Male, age 74, both hemispheres 36.9
Parahippocampal cortex
nTPM: 40.6
1850 Male, age 80, both hemispheres 47.8
1933 Female, age 85, both hemispheres 42.4
2250 Female, age 67, right hemisphere 42.2
2018 Male, age 76, both hemispheres 40.9
2532 Female, age 72, left hemisphere 40.5
2245 Female, age 91, both hemispheres 40.4
1990 Female, age 91, right hemisphere 40.2
2622 Female, age 67, right hemisphere 38.2
2693 Female, age 94, both hemispheres 38.2
2692 Male, age 74, both hemispheres 35.5
Perirhinal gyrus
nTPM: 46.2
1841 Female, age 85, right hemisphere 50.0
1847 Female, age 91, left hemisphere 48.1
1794 Male, age 80, right hemisphere 46.9
2521 Female, age 94, right hemisphere 43.3
2848 Male, age 76, right hemisphere 42.5
Subiculum
nTPM: 37.1
1977 Female, age 85, both hemispheres 41.6
2042 Male, age 76, both hemispheres 38.1
2729 Female, age 91, right hemisphere 37.6
1901 Male, age 80, both hemispheres 36.5
2619 Male, age 74, both hemispheres 35.9
2438 Female, age 94, left hemisphere 32.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 30.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 30.1
Samples: 197

Max nTPM: 48.3
Min nTPM: 18.5
Std nTPM: 5.6
Median nTPM: 29.1
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 48.3
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 45.3
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 45.1
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 44.1
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 43.4
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 42.6
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 42.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 42.0
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 41.7
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 40.8
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 40.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 4.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 4.2
FF:10153-102I9 76 years, female 4.4
FF:10169-103B7 60 years, female 4.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 15.5
Pig sample Sample description nTPM
Subiculum
nTPM: 14.4
Samples: 4

Max nTPM: 18.8
Min nTPM: 12.2
Sample A Female 18.8
Sample B Female 13.2
Sample C Male 12.2
Sample D Male 13.5
Dorsal hippocampus
nTPM: 15.5
Samples: 4

Max nTPM: 18.1
Min nTPM: 13.6
Sample A Female 18.1
Sample B Female 14.4
Sample C Male 13.6
Sample D Male 16.0
Entorhinal cortex
nTPM: 14.6
Samples: 4

Max nTPM: 15.9
Min nTPM: 13.2
Sample A Female 15.9
Sample B Female 14.8
Sample C Male 13.2
Sample D Male 14.4
Ventral hippocampus
nTPM: 13.6
Samples: 4

Max nTPM: 15.9
Min nTPM: 11.2
Sample A Female 15.9
Sample B Female 12.6
Sample C Male 11.2
Sample D Male 14.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 43.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 36.0
Samples: 4

Max nTPM: 41.3
Min nTPM: 33.9
Sample A Male 34.6
Sample B Male 33.9
Sample C Female 41.3
Sample D Female 34.1
Hippocampal formation
nTPM: 43.0
Samples: 4

Max nTPM: 47.2
Min nTPM: 38.4
Sample A Male 46.0
Sample B Male 38.4
Sample C Female 47.2
Sample D Female 40.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.2
70919675 Antisense, RP_050713_01_H03, Mouse strain C57BL/6J (56 days, male) 0.2

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