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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
26.0
nTPM
Monaco:
164.3
nTPM
Schmiedel:
657.9
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
26.0
HPA sample
nTPM
gdT-cell nTPM: 18.4
Samples: 6
Max nTPM: 24.5
Min nTPM: 14.2
P10809_1007
24.5
P10809_1022
15.6
P10809_1041
14.2
P10809_1060
16.3
P10809_1077
23.1
P10809_1098
16.7
MAIT T-cell nTPM: 19.0
Samples: 6
Max nTPM: 26.0
Min nTPM: 14.6
P10809_1006
26.0
P10809_1024
17.0
P10809_1043
14.6
P10809_1062
15.4
P10809_1083
22.5
P10809_1097
18.6
Memory CD4 T-cell nTPM: 22.2
Samples: 6
Max nTPM: 29.1
Min nTPM: 16.7
P10809_1014
23.5
P10809_1026
29.1
P10809_1045
22.0
P10809_1064
20.9
P10809_1086
20.9
P10809_1113
16.7
Memory CD8 T-cell nTPM: 19.7
Samples: 5
Max nTPM: 21.7
Min nTPM: 18.2
P10809_1012
20.8
P10809_1027
18.2
P10809_1046
21.7
P10809_1065
19.7
P10809_1111
18.3
Naive CD4 T-cell nTPM: 25.0
Samples: 6
Max nTPM: 32.7
Min nTPM: 19.9
P10809_1015
32.7
P10809_1030
22.9
P10809_1049
19.9
P10809_1068
27.5
P10809_1085
23.8
P10809_1112
23.0
Naive CD8 T-cell nTPM: 26.0
Samples: 6
Max nTPM: 44.4
Min nTPM: 14.1
P10809_1016
31.3
P10809_1031
44.4
P10809_1050
23.0
P10809_1069
24.4
P10809_1087
14.1
P10809_1110
18.9
T-reg nTPM: 19.1
Samples: 6
Max nTPM: 26.1
Min nTPM: 15.9
P10809_1018
18.4
P10809_1037
19.3
P10809_1056
16.2
P10809_1075
15.9
P10809_1094
26.1
P10809_1106
18.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
164.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 103.7
Samples: 4
Max nTPM: 193.6
Min nTPM: 49.1
RHH5202_R3573
49.1
RHH5230_R3602
193.6
RHH5259_R3631
122.4
RHH5288_R3660
49.7
Effector memory CD8 T-cell nTPM: 72.5
Samples: 4
Max nTPM: 93.3
Min nTPM: 30.8
RHH5203_R3574
77.3
RHH5231_R3603
93.3
RHH5260_R3632
88.6
RHH5289_R3661
30.8
MAIT T-cell nTPM: 132.7
Samples: 4
Max nTPM: 206.4
Min nTPM: 41.7
RHH5233_R3605
41.7
RHH5205_R3576
144.8
RHH5262_R3634
206.4
RHH5297_R3663
138.0
Memory CD4 T-cell TFH nTPM: 93.3
Samples: 4
Max nTPM: 150.7
Min nTPM: 68.5
RHH5300_R3666
150.7
RHH5236_R3608
71.0
RHH5265_R3637
83.0
RHH5208_R3579
68.5
Memory CD4 T-cell Th1 nTPM: 128.8
Samples: 4
Max nTPM: 171.3
Min nTPM: 88.9
RHH5210_R3581
88.9
RHH5302_R3668
128.8
RHH5238_R3610
126.2
RHH5267_R3639
171.3
Memory CD4 T-cell Th1/Th17 nTPM: 116.8
Samples: 4
Max nTPM: 193.3
Min nTPM: 50.0
RHH5303_R3669
50.0
RHH5211_R3582
125.8
RHH5239_R3611
98.0
RHH5268_R3640
193.3
Memory CD4 T-cell Th17 nTPM: 79.8
Samples: 4
Max nTPM: 149.5
Min nTPM: 15.7
RHH5304_R3670
39.0
RHH5212_R3583
115.1
RHH5240_R3612
15.7
RHH5269_R3641
149.5
Memory CD4 T-cell Th2 nTPM: 115.7
Samples: 4
Max nTPM: 149.8
Min nTPM: 46.8
RHH5305_R3671
123.4
RHH5213_R3584
142.9
RHH5241_R3613
46.8
RHH5270_R3642
149.8
Naive CD4 T-cell nTPM: 164.3
Samples: 4
Max nTPM: 211.8
Min nTPM: 121.0
RHH5306_R3672
167.8
RHH5214_R3585
121.0
RHH5242_R3614
156.5
RHH5271_R3643
211.8
Naive CD8 T-cell nTPM: 111.1
Samples: 4
Max nTPM: 161.5
Min nTPM: 62.3
RHH5201_R3572
62.3
RHH5229_R3601
85.9
RHH5258_R3630
161.5
RHH5287_R3659
134.5
Non-Vd2 gdTCR nTPM: 84.3
Samples: 4
Max nTPM: 135.5
Min nTPM: 36.7
RHH5235_R3607
118.0
RHH5264_R3636
36.7
RHH5207_R3578
46.9
RHH5299_R3665
135.5
T-reg nTPM: 109.5
Samples: 4
Max nTPM: 145.7
Min nTPM: 55.7
RHH5301_R3667
145.7
RHH5237_R3609
55.7
RHH5266_R3638
140.3
RHH5209_R3580
96.1
Terminal effector memory CD4 T-cell nTPM: 81.5
Samples: 2
Max nTPM: 106.9
Min nTPM: 56.1
RHH5243_R3615
106.9
RHH5272_R3644
56.1
Terminal effector memory CD8 T-cell nTPM: 82.7
Samples: 4
Max nTPM: 150.7
Min nTPM: 30.9
RHH5232_R3604
30.9
RHH5204_R3575
150.7
RHH5261_R3633
105.1
RHH5296_R3662
44.0
Vd2 gdTCR nTPM: 131.2
Samples: 4
Max nTPM: 162.6
Min nTPM: 88.3
RHH5234_R3606
162.6
RHH5206_R3577
119.7
RHH5263_R3635
88.3
RHH5298_R3664
154.3
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
