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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
75.0
nTPM
Monaco:
176.5
nTPM
Schmiedel:
102.0
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
75.0
HPA sample
nTPM
gdT-cell nTPM: 48.3
Samples: 6
Max nTPM: 63.5
Min nTPM: 23.5
P10809_1007
23.5
P10809_1022
41.5
P10809_1041
63.5
P10809_1060
50.0
P10809_1077
51.9
P10809_1098
59.3
MAIT T-cell nTPM: 47.8
Samples: 6
Max nTPM: 84.0
Min nTPM: 28.1
P10809_1006
28.1
P10809_1024
54.0
P10809_1043
34.6
P10809_1062
50.7
P10809_1083
84.0
P10809_1097
35.6
Memory CD4 T-cell nTPM: 75.0
Samples: 6
Max nTPM: 89.5
Min nTPM: 50.9
P10809_1014
50.9
P10809_1026
79.9
P10809_1045
83.1
P10809_1064
57.7
P10809_1086
89.5
P10809_1113
89.1
Memory CD8 T-cell nTPM: 65.7
Samples: 5
Max nTPM: 77.8
Min nTPM: 53.8
P10809_1012
53.8
P10809_1027
66.0
P10809_1046
73.9
P10809_1065
56.8
P10809_1111
77.8
Naive CD4 T-cell nTPM: 69.2
Samples: 6
Max nTPM: 107.8
Min nTPM: 36.8
P10809_1015
36.8
P10809_1030
107.8
P10809_1049
77.6
P10809_1068
59.8
P10809_1085
79.2
P10809_1112
54.2
Naive CD8 T-cell nTPM: 59.6
Samples: 6
Max nTPM: 76.5
Min nTPM: 43.8
P10809_1016
43.8
P10809_1031
76.5
P10809_1050
66.5
P10809_1069
53.9
P10809_1087
51.5
P10809_1110
65.5
T-reg nTPM: 5.8
Samples: 6
Max nTPM: 12.0
Min nTPM: 2.3
P10809_1018
3.3
P10809_1037
2.3
P10809_1056
9.7
P10809_1075
4.6
P10809_1094
3.1
P10809_1106
12.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
176.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 176.6
Samples: 4
Max nTPM: 220.9
Min nTPM: 132.0
RHH5202_R3573
220.9
RHH5230_R3602
136.4
RHH5259_R3631
132.0
RHH5288_R3660
216.9
Effector memory CD8 T-cell nTPM: 108.8
Samples: 4
Max nTPM: 154.6
Min nTPM: 73.5
RHH5203_R3574
99.5
RHH5231_R3603
73.5
RHH5260_R3632
107.4
RHH5289_R3661
154.6
MAIT T-cell nTPM: 67.1
Samples: 4
Max nTPM: 77.9
Min nTPM: 46.9
RHH5233_R3605
72.0
RHH5205_R3576
71.5
RHH5262_R3634
46.9
RHH5297_R3663
77.9
Memory CD4 T-cell TFH nTPM: 123.5
Samples: 4
Max nTPM: 136.9
Min nTPM: 109.6
RHH5300_R3666
124.8
RHH5236_R3608
122.5
RHH5265_R3637
109.6
RHH5208_R3579
136.9
Memory CD4 T-cell Th1 nTPM: 106.9
Samples: 4
Max nTPM: 132.9
Min nTPM: 80.4
RHH5210_R3581
132.9
RHH5302_R3668
119.4
RHH5238_R3610
80.4
RHH5267_R3639
94.9
Memory CD4 T-cell Th1/Th17 nTPM: 130.7
Samples: 4
Max nTPM: 173.0
Min nTPM: 95.4
RHH5303_R3669
173.0
RHH5211_R3582
146.3
RHH5239_R3611
95.4
RHH5268_R3640
108.0
Memory CD4 T-cell Th17 nTPM: 141.4
Samples: 4
Max nTPM: 188.7
Min nTPM: 123.6
RHH5304_R3670
126.2
RHH5212_R3583
188.7
RHH5240_R3612
127.1
RHH5269_R3641
123.6
Memory CD4 T-cell Th2 nTPM: 158.7
Samples: 4
Max nTPM: 193.0
Min nTPM: 131.5
RHH5305_R3671
144.4
RHH5213_R3584
193.0
RHH5241_R3613
165.8
RHH5270_R3642
131.5
Naive CD4 T-cell nTPM: 119.6
Samples: 4
Max nTPM: 142.6
Min nTPM: 105.8
RHH5306_R3672
105.8
RHH5214_R3585
142.6
RHH5242_R3614
123.1
RHH5271_R3643
106.9
Naive CD8 T-cell nTPM: 145.4
Samples: 4
Max nTPM: 169.6
Min nTPM: 127.5
RHH5201_R3572
136.9
RHH5229_R3601
127.5
RHH5258_R3630
169.6
RHH5287_R3659
147.7
Non-Vd2 gdTCR nTPM: 86.3
Samples: 4
Max nTPM: 109.1
Min nTPM: 57.9
RHH5235_R3607
88.7
RHH5264_R3636
109.1
RHH5207_R3578
57.9
RHH5299_R3665
89.5
T-reg nTPM: 50.7
Samples: 4
Max nTPM: 53.3
Min nTPM: 48.7
RHH5301_R3667
53.3
RHH5237_R3609
48.7
RHH5266_R3638
49.9
RHH5209_R3580
51.0
Terminal effector memory CD4 T-cell nTPM: 94.8
Samples: 2
Max nTPM: 106.4
Min nTPM: 83.2
RHH5243_R3615
106.4
RHH5272_R3644
83.2
Terminal effector memory CD8 T-cell nTPM: 89.5
Samples: 4
Max nTPM: 108.8
Min nTPM: 73.9
RHH5232_R3604
73.9
RHH5204_R3575
82.8
RHH5261_R3633
92.5
RHH5296_R3662
108.8
Vd2 gdTCR nTPM: 97.9
Samples: 4
Max nTPM: 122.9
Min nTPM: 81.3
RHH5234_R3606
82.7
RHH5206_R3577
81.3
RHH5263_R3635
104.6
RHH5298_R3664
122.9
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
