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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
260.9
nTPM
Monaco:
142.1
nTPM
Schmiedel:
197.0
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
260.9
HPA sample
nTPM
gdT-cell nTPM: 161.5
Samples: 6
Max nTPM: 208.2
Min nTPM: 120.9
P10809_1007
120.9
P10809_1022
152.1
P10809_1041
166.4
P10809_1060
149.0
P10809_1077
172.6
P10809_1098
208.2
MAIT T-cell nTPM: 252.7
Samples: 6
Max nTPM: 317.9
Min nTPM: 165.8
P10809_1006
165.8
P10809_1024
287.5
P10809_1043
222.0
P10809_1062
242.3
P10809_1083
280.9
P10809_1097
317.9
Memory CD4 T-cell nTPM: 260.2
Samples: 6
Max nTPM: 321.9
Min nTPM: 208.2
P10809_1014
233.5
P10809_1026
222.1
P10809_1045
208.2
P10809_1064
258.5
P10809_1086
321.9
P10809_1113
316.7
Memory CD8 T-cell nTPM: 208.2
Samples: 5
Max nTPM: 250.9
Min nTPM: 171.1
P10809_1012
171.1
P10809_1027
221.8
P10809_1046
178.5
P10809_1065
218.7
P10809_1111
250.9
Naive CD4 T-cell nTPM: 251.7
Samples: 6
Max nTPM: 275.0
Min nTPM: 234.6
P10809_1015
240.5
P10809_1030
244.0
P10809_1049
262.3
P10809_1068
275.0
P10809_1085
254.0
P10809_1112
234.6
Naive CD8 T-cell nTPM: 236.6
Samples: 6
Max nTPM: 276.3
Min nTPM: 205.7
P10809_1016
229.2
P10809_1031
205.7
P10809_1050
228.1
P10809_1069
276.3
P10809_1087
264.3
P10809_1110
216.2
T-reg nTPM: 260.9
Samples: 6
Max nTPM: 302.3
Min nTPM: 217.4
P10809_1018
217.4
P10809_1037
302.3
P10809_1056
269.6
P10809_1075
225.1
P10809_1094
248.9
P10809_1106
302.3
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
142.1
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 124.2
Samples: 4
Max nTPM: 166.5
Min nTPM: 85.8
RHH5202_R3573
111.0
RHH5230_R3602
85.8
RHH5259_R3631
133.6
RHH5288_R3660
166.5
Effector memory CD8 T-cell nTPM: 76.4
Samples: 4
Max nTPM: 95.8
Min nTPM: 56.1
RHH5203_R3574
95.8
RHH5231_R3603
74.0
RHH5260_R3632
79.5
RHH5289_R3661
56.1
MAIT T-cell nTPM: 111.6
Samples: 4
Max nTPM: 147.5
Min nTPM: 90.7
RHH5233_R3605
108.3
RHH5205_R3576
99.7
RHH5262_R3634
90.7
RHH5297_R3663
147.5
Memory CD4 T-cell TFH nTPM: 135.7
Samples: 4
Max nTPM: 175.3
Min nTPM: 110.6
RHH5300_R3666
110.6
RHH5236_R3608
175.3
RHH5265_R3637
119.3
RHH5208_R3579
137.5
Memory CD4 T-cell Th1 nTPM: 136.0
Samples: 4
Max nTPM: 192.9
Min nTPM: 95.5
RHH5210_R3581
95.5
RHH5302_R3668
192.9
RHH5238_R3610
134.2
RHH5267_R3639
121.5
Memory CD4 T-cell Th1/Th17 nTPM: 135.0
Samples: 4
Max nTPM: 191.2
Min nTPM: 100.2
RHH5303_R3669
191.2
RHH5211_R3582
100.2
RHH5239_R3611
103.0
RHH5268_R3640
145.7
Memory CD4 T-cell Th17 nTPM: 112.1
Samples: 4
Max nTPM: 130.0
Min nTPM: 97.8
RHH5304_R3670
130.0
RHH5212_R3583
122.4
RHH5240_R3612
97.8
RHH5269_R3641
98.2
Memory CD4 T-cell Th2 nTPM: 99.0
Samples: 4
Max nTPM: 121.0
Min nTPM: 75.2
RHH5305_R3671
121.0
RHH5213_R3584
75.2
RHH5241_R3613
111.4
RHH5270_R3642
88.2
Naive CD4 T-cell nTPM: 142.1
Samples: 4
Max nTPM: 169.5
Min nTPM: 102.6
RHH5306_R3672
162.7
RHH5214_R3585
169.5
RHH5242_R3614
133.6
RHH5271_R3643
102.6
Naive CD8 T-cell nTPM: 117.5
Samples: 4
Max nTPM: 134.8
Min nTPM: 101.4
RHH5201_R3572
105.0
RHH5229_R3601
101.4
RHH5258_R3630
128.9
RHH5287_R3659
134.8
Non-Vd2 gdTCR nTPM: 71.7
Samples: 4
Max nTPM: 96.7
Min nTPM: 53.1
RHH5235_R3607
53.1
RHH5264_R3636
81.4
RHH5207_R3578
55.4
RHH5299_R3665
96.7
T-reg nTPM: 99.7
Samples: 4
Max nTPM: 114.6
Min nTPM: 84.6
RHH5301_R3667
111.8
RHH5237_R3609
114.6
RHH5266_R3638
84.6
RHH5209_R3580
87.8
Terminal effector memory CD4 T-cell nTPM: 80.7
Samples: 2
Max nTPM: 95.7
Min nTPM: 65.6
RHH5243_R3615
65.6
RHH5272_R3644
95.7
Terminal effector memory CD8 T-cell nTPM: 107.1
Samples: 4
Max nTPM: 205.7
Min nTPM: 54.1
RHH5232_R3604
54.1
RHH5204_R3575
205.7
RHH5261_R3633
69.5
RHH5296_R3662
99.0
Vd2 gdTCR nTPM: 136.6
Samples: 4
Max nTPM: 218.7
Min nTPM: 83.7
RHH5234_R3606
83.7
RHH5206_R3577
218.7
RHH5263_R3635
94.2
RHH5298_R3664
149.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
