HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: Medium
RNA expressioni
Consensus:22.6 nTPM
HPA Brain:19.2 nTPM
GTEx:22.6 nTPM
FANTOM5:27.9 Scaled Tags Per Million
Pig:9.1 nTPM
Mouse:13.0 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA029747
Glial cells High
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 19.2
Sample id Sample description nTPM
Hippocampus
nTPM: 19.2
2148 Female, age 91, left hemisphere 23.8
1911 Female, age 85, right hemisphere 21.6
1898 Male, age 80, left hemisphere 21.3
2529 Female, age 94, left hemisphere 17.5
1855 Male, age 76, left hemisphere 16.5
2621 Female, age 67, right hemisphere 14.6
Dentate gyrus
nTPM: 15.2
2528 Male, age 74, both hemispheres 20.7
1927 Female, age 91, both hemispheres 17.5
2246 Female, age 85, both hemispheres 16.5
2530 Female, age 94, left hemisphere 13.2
2010 Male, age 76, both hemispheres 12.2
2531 Female, age 67, both hemispheres 11.4
Entorhinal gyrus
nTPM: 15.5
2117 Female, age 91, right hemisphere 24.8
1938 Female, age 85, left hemisphere 19.2
1787 Male, age 76, left hemisphere 15.5
2764 Male, age 80, right hemisphere 11.9
2686 Male, age 75, right hemisphere 11.2
2613 Female, age 94, left hemisphere 10.2
Hippocampus, CA1
nTPM: 17.3
2527 Male, age 74, both hemispheres 20.9
1873 Female, age 85, both hemispheres 20.2
2082 Female, age 91, right hemisphere 17.6
2749 Male, age 80, left hemisphere 16.0
2045 Male, age 76, both hemispheres 11.6
Hippocampus, CA2
nTPM: 16.7
1940 Female, age 85, left hemisphere 20.5
2249 Male, age 74, both hemispheres 20.5
2113 Female, age 91, right hemisphere 18.7
1963 Male, age 80, left hemisphere 15.6
2437 Female, age 94, left hemisphere 13.8
1892 Male, age 76, both hemispheres 11.2
Hippocampus, CA3
nTPM: 15.3
1891 Female, age 85, both hemispheres 22.6
2436 Male, age 74, both hemispheres 18.3
2137 Male, age 80, left hemisphere 13.5
2620 Female, age 94, left hemisphere 13.4
2861 Female, age 67, both hemispheres 12.6
1867 Male, age 76, both hemispheres 11.6
Parahippocampal cortex
nTPM: 15.0
2250 Female, age 67, right hemisphere 19.0
2692 Male, age 74, both hemispheres 18.8
1933 Female, age 85, both hemispheres 18.1
1990 Female, age 91, right hemisphere 17.1
1850 Male, age 80, both hemispheres 15.3
2622 Female, age 67, right hemisphere 14.1
2693 Female, age 94, both hemispheres 13.8
2245 Female, age 91, both hemispheres 13.0
2532 Female, age 72, left hemisphere 10.7
2018 Male, age 76, both hemispheres 10.2
Perirhinal gyrus
nTPM: 15.1
1841 Female, age 85, right hemisphere 16.5
1847 Female, age 91, left hemisphere 16.5
1794 Male, age 80, right hemisphere 15.6
2848 Male, age 76, right hemisphere 13.5
2521 Female, age 94, right hemisphere 13.3
Subiculum
nTPM: 17.0
2729 Female, age 91, right hemisphere 29.8
2619 Male, age 74, both hemispheres 18.9
1977 Female, age 85, both hemispheres 16.7
1901 Male, age 80, both hemispheres 15.1
2042 Male, age 76, both hemispheres 14.2
2438 Female, age 94, left hemisphere 7.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 22.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 22.6
Samples: 197

Max nTPM: 60.1
Min nTPM: 8.7
Std nTPM: 8.0
Median nTPM: 21.4
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 60.1
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 52.1
GTEX-13SLW-0011-R1a-SM-5S2W7 70-79 years, male 41.9
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 41.5
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 41.0
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 40.6
GTEX-13FHO-0011-R1b-SM-5KLZG 60-69 years, male 39.5
GTEX-1F75W-0011-R1a-SM-ARU81 60-69 years, male 39.3
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 39.1
GTEX-1A3MX-0011-R1b-SM-7P8PH 60-69 years, male 39.0
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 38.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 27.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 27.9
FF:10153-102I9 76 years, female 32.0
FF:10169-103B7 60 years, female 23.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 9.1
Pig sample Sample description nTPM
Subiculum
nTPM: 9.1
Samples: 4

Max nTPM: 10.6
Min nTPM: 6.5
Sample A Female 6.5
Sample B Female 8.5
Sample C Male 10.6
Sample D Male 10.6
Dorsal hippocampus
nTPM: 8.2
Samples: 4

Max nTPM: 10.0
Min nTPM: 6.1
Sample A Female 6.1
Sample B Female 7.6
Sample C Male 9.1
Sample D Male 10.0
Entorhinal cortex
nTPM: 8.0
Samples: 4

Max nTPM: 9.6
Min nTPM: 6.8
Sample A Female 7.0
Sample B Female 6.8
Sample C Male 9.6
Sample D Male 8.7
Ventral hippocampus
nTPM: 9.1
Samples: 4

Max nTPM: 10.7
Min nTPM: 7.4
Sample A Female 7.4
Sample B Female 8.0
Sample C Male 10.7
Sample D Male 10.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 13.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 13.1
Samples: 4

Max nTPM: 16.2
Min nTPM: 9.6
Sample A Male 9.6
Sample B Male 12.5
Sample C Female 13.9
Sample D Female 16.2
Hippocampal formation
nTPM: 13.0
Samples: 4

Max nTPM: 14.8
Min nTPM: 11.7
Sample A Male 14.8
Sample B Male 13.6
Sample C Female 11.7
Sample D Female 12.0

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