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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
40.2
nTPM
Monaco:
152.4
nTPM
Schmiedel:
144.7
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
40.2
HPA sample
nTPM
gdT-cell nTPM: 28.1
Samples: 6
Max nTPM: 35.5
Min nTPM: 17.3
P10809_1007
35.5
P10809_1022
31.7
P10809_1041
17.3
P10809_1060
23.2
P10809_1077
30.3
P10809_1098
30.5
MAIT T-cell nTPM: 31.7
Samples: 6
Max nTPM: 45.0
Min nTPM: 21.1
P10809_1006
45.0
P10809_1024
33.5
P10809_1043
25.0
P10809_1062
30.9
P10809_1083
34.6
P10809_1097
21.1
Memory CD4 T-cell nTPM: 34.0
Samples: 6
Max nTPM: 57.7
Min nTPM: 23.7
P10809_1014
57.7
P10809_1026
23.7
P10809_1045
27.6
P10809_1064
27.4
P10809_1086
32.0
P10809_1113
35.6
Memory CD8 T-cell nTPM: 34.3
Samples: 5
Max nTPM: 45.4
Min nTPM: 24.9
P10809_1012
45.4
P10809_1027
40.6
P10809_1046
26.8
P10809_1065
24.9
P10809_1111
33.8
Naive CD4 T-cell nTPM: 30.0
Samples: 6
Max nTPM: 58.2
Min nTPM: 17.2
P10809_1015
58.2
P10809_1030
26.0
P10809_1049
17.2
P10809_1068
25.8
P10809_1085
25.9
P10809_1112
26.8
Naive CD8 T-cell nTPM: 31.5
Samples: 6
Max nTPM: 54.6
Min nTPM: 22.9
P10809_1016
54.6
P10809_1031
29.8
P10809_1050
25.5
P10809_1069
23.1
P10809_1087
32.8
P10809_1110
22.9
T-reg nTPM: 40.2
Samples: 6
Max nTPM: 66.9
Min nTPM: 28.3
P10809_1018
66.9
P10809_1037
38.6
P10809_1056
36.3
P10809_1075
28.3
P10809_1094
32.8
P10809_1106
38.5
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
152.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 120.1
Samples: 4
Max nTPM: 146.0
Min nTPM: 91.3
RHH5202_R3573
146.0
RHH5230_R3602
129.1
RHH5259_R3631
91.3
RHH5288_R3660
114.0
Effector memory CD8 T-cell nTPM: 139.9
Samples: 4
Max nTPM: 155.1
Min nTPM: 129.0
RHH5203_R3574
155.1
RHH5231_R3603
129.0
RHH5260_R3632
133.2
RHH5289_R3661
142.3
MAIT T-cell nTPM: 152.4
Samples: 4
Max nTPM: 185.7
Min nTPM: 128.8
RHH5233_R3605
128.8
RHH5205_R3576
161.6
RHH5262_R3634
185.7
RHH5297_R3663
133.6
Memory CD4 T-cell TFH nTPM: 127.7
Samples: 4
Max nTPM: 144.7
Min nTPM: 114.3
RHH5300_R3666
122.4
RHH5236_R3608
129.5
RHH5265_R3637
114.3
RHH5208_R3579
144.7
Memory CD4 T-cell Th1 nTPM: 119.2
Samples: 4
Max nTPM: 150.1
Min nTPM: 83.6
RHH5210_R3581
150.1
RHH5302_R3668
117.7
RHH5238_R3610
83.6
RHH5267_R3639
125.4
Memory CD4 T-cell Th1/Th17 nTPM: 120.1
Samples: 4
Max nTPM: 145.9
Min nTPM: 90.8
RHH5303_R3669
131.1
RHH5211_R3582
145.9
RHH5239_R3611
90.8
RHH5268_R3640
112.5
Memory CD4 T-cell Th17 nTPM: 140.0
Samples: 4
Max nTPM: 159.1
Min nTPM: 123.2
RHH5304_R3670
133.1
RHH5212_R3583
159.1
RHH5240_R3612
144.5
RHH5269_R3641
123.2
Memory CD4 T-cell Th2 nTPM: 139.7
Samples: 4
Max nTPM: 168.1
Min nTPM: 122.9
RHH5305_R3671
140.0
RHH5213_R3584
168.1
RHH5241_R3613
122.9
RHH5270_R3642
127.8
Naive CD4 T-cell nTPM: 107.6
Samples: 4
Max nTPM: 121.1
Min nTPM: 94.4
RHH5306_R3672
99.4
RHH5214_R3585
115.5
RHH5242_R3614
121.1
RHH5271_R3643
94.4
Naive CD8 T-cell nTPM: 110.4
Samples: 4
Max nTPM: 123.8
Min nTPM: 99.0
RHH5201_R3572
114.3
RHH5229_R3601
104.6
RHH5258_R3630
99.0
RHH5287_R3659
123.8
Non-Vd2 gdTCR nTPM: 133.8
Samples: 4
Max nTPM: 150.2
Min nTPM: 117.0
RHH5235_R3607
117.0
RHH5264_R3636
142.0
RHH5207_R3578
150.2
RHH5299_R3665
126.1
T-reg nTPM: 132.7
Samples: 4
Max nTPM: 166.6
Min nTPM: 118.0
RHH5301_R3667
125.7
RHH5237_R3609
166.6
RHH5266_R3638
120.5
RHH5209_R3580
118.0
Terminal effector memory CD4 T-cell nTPM: 127.2
Samples: 2
Max nTPM: 130.6
Min nTPM: 123.7
RHH5243_R3615
130.6
RHH5272_R3644
123.7
Terminal effector memory CD8 T-cell nTPM: 122.2
Samples: 4
Max nTPM: 149.1
Min nTPM: 76.9
RHH5232_R3604
76.9
RHH5204_R3575
149.1
RHH5261_R3633
136.8
RHH5296_R3662
125.9
Vd2 gdTCR nTPM: 135.2
Samples: 4
Max nTPM: 156.3
Min nTPM: 113.9
RHH5234_R3606
132.8
RHH5206_R3577
156.3
RHH5263_R3635
137.7
RHH5298_R3664
113.9
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
