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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
9.7
nTPM
Monaco:
55.5
nTPM
Schmiedel:
24.1
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
9.7
HPA sample
nTPM
gdT-cell nTPM: 8.8
Samples: 6
Max nTPM: 10.7
Min nTPM: 3.9
P10809_1007
10.1
P10809_1022
8.9
P10809_1041
8.8
P10809_1060
3.9
P10809_1077
10.7
P10809_1098
10.2
MAIT T-cell nTPM: 7.2
Samples: 6
Max nTPM: 16.4
Min nTPM: 2.0
P10809_1006
4.2
P10809_1024
2.6
P10809_1043
5.5
P10809_1062
2.0
P10809_1083
16.4
P10809_1097
12.5
Memory CD4 T-cell nTPM: 9.7
Samples: 6
Max nTPM: 26.8
Min nTPM: 3.4
P10809_1014
8.1
P10809_1026
3.9
P10809_1045
9.6
P10809_1064
3.4
P10809_1086
26.8
P10809_1113
6.5
Memory CD8 T-cell nTPM: 9.3
Samples: 5
Max nTPM: 13.4
Min nTPM: 5.5
P10809_1012
8.1
P10809_1027
13.4
P10809_1046
5.5
P10809_1065
6.3
P10809_1111
13.4
Naive CD4 T-cell nTPM: 4.2
Samples: 6
Max nTPM: 18.8
Min nTPM: 0.3
P10809_1015
1.6
P10809_1030
1.5
P10809_1049
0.9
P10809_1068
0.3
P10809_1085
18.8
P10809_1112
2.3
Naive CD8 T-cell nTPM: 7.2
Samples: 6
Max nTPM: 27.6
Min nTPM: 1.0
P10809_1016
1.9
P10809_1031
1.0
P10809_1050
5.9
P10809_1069
1.4
P10809_1087
27.6
P10809_1110
5.3
T-reg nTPM: 0.6
Samples: 6
Max nTPM: 3.7
Min nTPM: 0.0
P10809_1018
0.0
P10809_1037
0.0
P10809_1056
0.0
P10809_1075
0.0
P10809_1094
3.7
P10809_1106
0.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
55.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 17.2
Samples: 4
Max nTPM: 27.6
Min nTPM: 4.9
RHH5202_R3573
17.2
RHH5230_R3602
27.6
RHH5259_R3631
19.0
RHH5288_R3660
4.9
Effector memory CD8 T-cell nTPM: 19.5
Samples: 4
Max nTPM: 43.3
Min nTPM: 0.0
RHH5203_R3574
10.2
RHH5231_R3603
43.3
RHH5260_R3632
24.4
RHH5289_R3661
0.0
MAIT T-cell nTPM: 14.0
Samples: 4
Max nTPM: 20.6
Min nTPM: 5.1
RHH5233_R3605
5.1
RHH5205_R3576
20.6
RHH5262_R3634
15.0
RHH5297_R3663
15.3
Memory CD4 T-cell TFH nTPM: 10.2
Samples: 4
Max nTPM: 23.9
Min nTPM: 0.1
RHH5300_R3666
13.9
RHH5236_R3608
23.9
RHH5265_R3637
2.9
RHH5208_R3579
0.1
Memory CD4 T-cell Th1 nTPM: 21.0
Samples: 4
Max nTPM: 34.6
Min nTPM: 2.7
RHH5210_R3581
2.7
RHH5302_R3668
15.6
RHH5238_R3610
34.6
RHH5267_R3639
31.0
Memory CD4 T-cell Th1/Th17 nTPM: 34.0
Samples: 4
Max nTPM: 66.7
Min nTPM: 11.2
RHH5303_R3669
11.2
RHH5211_R3582
25.6
RHH5239_R3611
66.7
RHH5268_R3640
32.4
Memory CD4 T-cell Th17 nTPM: 9.2
Samples: 4
Max nTPM: 14.4
Min nTPM: 6.7
RHH5304_R3670
6.9
RHH5212_R3583
14.4
RHH5240_R3612
6.7
RHH5269_R3641
8.8
Memory CD4 T-cell Th2 nTPM: 6.8
Samples: 4
Max nTPM: 13.1
Min nTPM: 3.7
RHH5305_R3671
6.4
RHH5213_R3584
13.1
RHH5241_R3613
3.7
RHH5270_R3642
4.1
Naive CD4 T-cell nTPM: 2.0
Samples: 4
Max nTPM: 2.8
Min nTPM: 1.0
RHH5306_R3672
1.0
RHH5214_R3585
1.7
RHH5242_R3614
2.6
RHH5271_R3643
2.8
Naive CD8 T-cell nTPM: 8.7
Samples: 4
Max nTPM: 15.2
Min nTPM: 4.5
RHH5201_R3572
4.5
RHH5229_R3601
6.5
RHH5258_R3630
8.4
RHH5287_R3659
15.2
Non-Vd2 gdTCR nTPM: 29.6
Samples: 4
Max nTPM: 99.3
Min nTPM: 0.8
RHH5235_R3607
99.3
RHH5264_R3636
4.1
RHH5207_R3578
0.8
RHH5299_R3665
14.2
T-reg nTPM: 3.7
Samples: 4
Max nTPM: 6.9
Min nTPM: 2.4
RHH5301_R3667
2.5
RHH5237_R3609
2.4
RHH5266_R3638
6.9
RHH5209_R3580
2.9
Terminal effector memory CD4 T-cell nTPM: 55.5
Samples: 2
Max nTPM: 108.3
Min nTPM: 2.6
RHH5243_R3615
108.3
RHH5272_R3644
2.6
Terminal effector memory CD8 T-cell nTPM: 20.2
Samples: 4
Max nTPM: 38.4
Min nTPM: 3.7
RHH5232_R3604
20.7
RHH5204_R3575
38.4
RHH5261_R3633
17.8
RHH5296_R3662
3.7
Vd2 gdTCR nTPM: 27.3
Samples: 4
Max nTPM: 52.6
Min nTPM: 9.7
RHH5234_R3606
52.6
RHH5206_R3577
9.7
RHH5263_R3635
24.3
RHH5298_R3664
22.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
