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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
77.5
nTPM
Monaco:
164.4
nTPM
Schmiedel:
373.2
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
77.5
HPA sample
nTPM
gdT-cell nTPM: 58.0
Samples: 6
Max nTPM: 72.0
Min nTPM: 42.5
P10809_1007
47.1
P10809_1022
72.0
P10809_1041
63.7
P10809_1060
42.5
P10809_1077
58.0
P10809_1098
64.8
MAIT T-cell nTPM: 77.5
Samples: 6
Max nTPM: 99.5
Min nTPM: 55.6
P10809_1006
79.3
P10809_1024
99.5
P10809_1043
70.8
P10809_1062
84.0
P10809_1083
55.6
P10809_1097
75.9
Memory CD4 T-cell nTPM: 60.0
Samples: 6
Max nTPM: 65.0
Min nTPM: 52.7
P10809_1014
64.2
P10809_1026
52.7
P10809_1045
65.0
P10809_1064
55.7
P10809_1086
61.7
P10809_1113
60.7
Memory CD8 T-cell nTPM: 63.4
Samples: 5
Max nTPM: 70.3
Min nTPM: 57.6
P10809_1012
66.6
P10809_1027
58.4
P10809_1046
64.3
P10809_1065
70.3
P10809_1111
57.6
Naive CD4 T-cell nTPM: 60.1
Samples: 6
Max nTPM: 64.6
Min nTPM: 53.0
P10809_1015
64.6
P10809_1030
63.2
P10809_1049
58.7
P10809_1068
60.2
P10809_1085
61.1
P10809_1112
53.0
Naive CD8 T-cell nTPM: 65.1
Samples: 6
Max nTPM: 73.9
Min nTPM: 52.8
P10809_1016
69.0
P10809_1031
67.7
P10809_1050
52.8
P10809_1069
73.9
P10809_1087
61.8
P10809_1110
65.4
T-reg nTPM: 68.6
Samples: 6
Max nTPM: 88.6
Min nTPM: 54.3
P10809_1018
63.9
P10809_1037
64.7
P10809_1056
66.3
P10809_1075
54.3
P10809_1094
73.8
P10809_1106
88.6
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
164.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 127.8
Samples: 4
Max nTPM: 132.4
Min nTPM: 124.0
RHH5202_R3573
132.4
RHH5230_R3602
124.0
RHH5259_R3631
129.6
RHH5288_R3660
125.0
Effector memory CD8 T-cell nTPM: 150.1
Samples: 4
Max nTPM: 172.3
Min nTPM: 137.4
RHH5203_R3574
172.3
RHH5231_R3603
151.2
RHH5260_R3632
137.4
RHH5289_R3661
139.6
MAIT T-cell nTPM: 151.0
Samples: 4
Max nTPM: 179.1
Min nTPM: 124.1
RHH5233_R3605
159.5
RHH5205_R3576
179.1
RHH5262_R3634
141.3
RHH5297_R3663
124.1
Memory CD4 T-cell TFH nTPM: 129.3
Samples: 4
Max nTPM: 148.3
Min nTPM: 115.1
RHH5300_R3666
120.4
RHH5236_R3608
115.1
RHH5265_R3637
133.4
RHH5208_R3579
148.3
Memory CD4 T-cell Th1 nTPM: 124.3
Samples: 4
Max nTPM: 149.6
Min nTPM: 100.0
RHH5210_R3581
134.7
RHH5302_R3668
112.7
RHH5238_R3610
100.0
RHH5267_R3639
149.6
Memory CD4 T-cell Th1/Th17 nTPM: 152.9
Samples: 4
Max nTPM: 180.8
Min nTPM: 135.8
RHH5303_R3669
149.8
RHH5211_R3582
180.8
RHH5239_R3611
145.2
RHH5268_R3640
135.8
Memory CD4 T-cell Th17 nTPM: 164.4
Samples: 4
Max nTPM: 181.2
Min nTPM: 147.0
RHH5304_R3670
147.0
RHH5212_R3583
159.6
RHH5240_R3612
169.8
RHH5269_R3641
181.2
Memory CD4 T-cell Th2 nTPM: 146.0
Samples: 4
Max nTPM: 159.9
Min nTPM: 121.8
RHH5305_R3671
149.4
RHH5213_R3584
159.9
RHH5241_R3613
121.8
RHH5270_R3642
152.8
Naive CD4 T-cell nTPM: 130.2
Samples: 4
Max nTPM: 155.2
Min nTPM: 115.1
RHH5306_R3672
122.6
RHH5214_R3585
115.1
RHH5242_R3614
127.7
RHH5271_R3643
155.2
Naive CD8 T-cell nTPM: 151.3
Samples: 4
Max nTPM: 172.8
Min nTPM: 116.1
RHH5201_R3572
172.8
RHH5229_R3601
116.1
RHH5258_R3630
159.7
RHH5287_R3659
156.7
Non-Vd2 gdTCR nTPM: 134.0
Samples: 4
Max nTPM: 159.5
Min nTPM: 112.9
RHH5235_R3607
159.5
RHH5264_R3636
128.4
RHH5207_R3578
135.2
RHH5299_R3665
112.9
T-reg nTPM: 125.4
Samples: 4
Max nTPM: 141.4
Min nTPM: 113.0
RHH5301_R3667
126.1
RHH5237_R3609
113.0
RHH5266_R3638
121.0
RHH5209_R3580
141.4
Terminal effector memory CD4 T-cell nTPM: 131.7
Samples: 2
Max nTPM: 147.7
Min nTPM: 115.7
RHH5243_R3615
115.7
RHH5272_R3644
147.7
Terminal effector memory CD8 T-cell nTPM: 131.4
Samples: 4
Max nTPM: 153.1
Min nTPM: 122.4
RHH5232_R3604
124.0
RHH5204_R3575
126.2
RHH5261_R3633
153.1
RHH5296_R3662
122.4
Vd2 gdTCR nTPM: 123.4
Samples: 4
Max nTPM: 157.1
Min nTPM: 97.2
RHH5234_R3606
120.6
RHH5206_R3577
118.7
RHH5263_R3635
157.1
RHH5298_R3664
97.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
