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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
153.4
nTPM
Monaco:
247.0
nTPM
Schmiedel:
163.0
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
153.4
HPA sample
nTPM
gdT-cell nTPM: 117.0
Samples: 6
Max nTPM: 135.9
Min nTPM: 81.5
P10809_1007
81.5
P10809_1022
135.9
P10809_1041
134.2
P10809_1060
106.3
P10809_1077
111.7
P10809_1098
132.6
MAIT T-cell nTPM: 98.5
Samples: 6
Max nTPM: 104.3
Min nTPM: 92.2
P10809_1006
95.4
P10809_1024
100.3
P10809_1043
99.1
P10809_1062
99.4
P10809_1083
92.2
P10809_1097
104.3
Memory CD4 T-cell nTPM: 117.8
Samples: 6
Max nTPM: 142.7
Min nTPM: 96.3
P10809_1014
96.3
P10809_1026
117.7
P10809_1045
142.7
P10809_1064
132.2
P10809_1086
103.6
P10809_1113
114.1
Memory CD8 T-cell nTPM: 131.1
Samples: 5
Max nTPM: 146.7
Min nTPM: 110.6
P10809_1012
123.1
P10809_1027
110.6
P10809_1046
136.3
P10809_1065
138.6
P10809_1111
146.7
Naive CD4 T-cell nTPM: 92.2
Samples: 6
Max nTPM: 117.2
Min nTPM: 76.0
P10809_1015
76.0
P10809_1030
79.6
P10809_1049
117.2
P10809_1068
90.4
P10809_1085
94.9
P10809_1112
94.8
Naive CD8 T-cell nTPM: 97.7
Samples: 6
Max nTPM: 124.8
Min nTPM: 51.5
P10809_1016
51.5
P10809_1031
98.0
P10809_1050
110.1
P10809_1069
124.8
P10809_1087
112.7
P10809_1110
88.8
T-reg nTPM: 153.4
Samples: 6
Max nTPM: 216.2
Min nTPM: 128.8
P10809_1018
130.4
P10809_1037
155.8
P10809_1056
216.2
P10809_1075
128.8
P10809_1094
131.3
P10809_1106
157.8
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
247.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 193.2
Samples: 4
Max nTPM: 219.1
Min nTPM: 167.3
RHH5202_R3573
167.3
RHH5230_R3602
194.7
RHH5259_R3631
219.1
RHH5288_R3660
191.8
Effector memory CD8 T-cell nTPM: 247.0
Samples: 4
Max nTPM: 282.9
Min nTPM: 217.5
RHH5203_R3574
218.9
RHH5231_R3603
282.9
RHH5260_R3632
268.8
RHH5289_R3661
217.5
MAIT T-cell nTPM: 146.8
Samples: 4
Max nTPM: 197.9
Min nTPM: 106.3
RHH5233_R3605
138.3
RHH5205_R3576
197.9
RHH5262_R3634
144.8
RHH5297_R3663
106.3
Memory CD4 T-cell TFH nTPM: 200.6
Samples: 4
Max nTPM: 268.8
Min nTPM: 156.0
RHH5300_R3666
156.0
RHH5236_R3608
268.8
RHH5265_R3637
189.5
RHH5208_R3579
188.2
Memory CD4 T-cell Th1 nTPM: 172.0
Samples: 4
Max nTPM: 215.8
Min nTPM: 139.8
RHH5210_R3581
139.8
RHH5302_R3668
144.2
RHH5238_R3610
215.8
RHH5267_R3639
188.0
Memory CD4 T-cell Th1/Th17 nTPM: 189.2
Samples: 4
Max nTPM: 237.4
Min nTPM: 148.5
RHH5303_R3669
148.5
RHH5211_R3582
187.8
RHH5239_R3611
237.4
RHH5268_R3640
183.0
Memory CD4 T-cell Th17 nTPM: 172.2
Samples: 4
Max nTPM: 215.9
Min nTPM: 148.0
RHH5304_R3670
148.0
RHH5212_R3583
162.7
RHH5240_R3612
215.9
RHH5269_R3641
162.1
Memory CD4 T-cell Th2 nTPM: 193.9
Samples: 4
Max nTPM: 218.3
Min nTPM: 174.1
RHH5305_R3671
174.1
RHH5213_R3584
218.3
RHH5241_R3613
187.2
RHH5270_R3642
196.1
Naive CD4 T-cell nTPM: 156.7
Samples: 4
Max nTPM: 172.7
Min nTPM: 122.2
RHH5306_R3672
122.2
RHH5214_R3585
172.7
RHH5242_R3614
159.3
RHH5271_R3643
172.6
Naive CD8 T-cell nTPM: 128.8
Samples: 4
Max nTPM: 147.2
Min nTPM: 108.9
RHH5201_R3572
124.4
RHH5229_R3601
147.2
RHH5258_R3630
108.9
RHH5287_R3659
134.7
Non-Vd2 gdTCR nTPM: 194.0
Samples: 4
Max nTPM: 207.1
Min nTPM: 177.9
RHH5235_R3607
207.1
RHH5264_R3636
177.9
RHH5207_R3578
205.3
RHH5299_R3665
185.8
T-reg nTPM: 176.9
Samples: 4
Max nTPM: 224.9
Min nTPM: 136.1
RHH5301_R3667
136.1
RHH5237_R3609
224.9
RHH5266_R3638
163.7
RHH5209_R3580
182.7
Terminal effector memory CD4 T-cell nTPM: 181.5
Samples: 2
Max nTPM: 199.7
Min nTPM: 163.2
RHH5243_R3615
199.7
RHH5272_R3644
163.2
Terminal effector memory CD8 T-cell nTPM: 206.4
Samples: 4
Max nTPM: 258.7
Min nTPM: 168.1
RHH5232_R3604
225.0
RHH5204_R3575
173.8
RHH5261_R3633
258.7
RHH5296_R3662
168.1
Vd2 gdTCR nTPM: 191.7
Samples: 4
Max nTPM: 235.6
Min nTPM: 159.5
RHH5234_R3606
196.0
RHH5206_R3577
175.5
RHH5263_R3635
235.6
RHH5298_R3664
159.5
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
