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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
469.0
nTPM
Monaco:
56.4
nTPM
Schmiedel:
126.3
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
469.0
HPA sample
nTPM
gdT-cell nTPM: 290.3
Samples: 6
Max nTPM: 344.6
Min nTPM: 232.3
P10809_1007
254.9
P10809_1022
326.2
P10809_1041
344.6
P10809_1060
232.3
P10809_1077
316.8
P10809_1098
267.0
MAIT T-cell nTPM: 356.7
Samples: 6
Max nTPM: 444.6
Min nTPM: 222.3
P10809_1006
222.3
P10809_1024
378.0
P10809_1043
394.1
P10809_1062
407.1
P10809_1083
294.0
P10809_1097
444.6
Memory CD4 T-cell nTPM: 403.1
Samples: 6
Max nTPM: 493.9
Min nTPM: 316.1
P10809_1014
316.1
P10809_1026
493.9
P10809_1045
460.3
P10809_1064
395.3
P10809_1086
333.9
P10809_1113
418.8
Memory CD8 T-cell nTPM: 337.1
Samples: 5
Max nTPM: 390.2
Min nTPM: 277.5
P10809_1012
277.5
P10809_1027
364.7
P10809_1046
390.2
P10809_1065
350.6
P10809_1111
302.3
Naive CD4 T-cell nTPM: 447.5
Samples: 6
Max nTPM: 607.8
Min nTPM: 299.4
P10809_1015
299.4
P10809_1030
491.8
P10809_1049
607.8
P10809_1068
495.8
P10809_1085
398.6
P10809_1112
391.4
Naive CD8 T-cell nTPM: 353.0
Samples: 6
Max nTPM: 402.5
Min nTPM: 262.6
P10809_1016
341.2
P10809_1031
396.5
P10809_1050
388.1
P10809_1069
402.5
P10809_1087
262.6
P10809_1110
327.2
T-reg nTPM: 469.0
Samples: 6
Max nTPM: 542.7
Min nTPM: 356.1
P10809_1018
356.1
P10809_1037
484.7
P10809_1056
542.7
P10809_1075
478.4
P10809_1094
487.4
P10809_1106
464.9
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
56.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 45.6
Samples: 4
Max nTPM: 61.1
Min nTPM: 23.2
RHH5202_R3573
23.2
RHH5230_R3602
52.4
RHH5259_R3631
61.1
RHH5288_R3660
45.7
Effector memory CD8 T-cell nTPM: 33.9
Samples: 4
Max nTPM: 43.4
Min nTPM: 27.5
RHH5203_R3574
33.7
RHH5231_R3603
31.0
RHH5260_R3632
43.4
RHH5289_R3661
27.5
MAIT T-cell nTPM: 34.0
Samples: 4
Max nTPM: 39.7
Min nTPM: 29.0
RHH5233_R3605
31.5
RHH5205_R3576
29.0
RHH5262_R3634
39.7
RHH5297_R3663
35.7
Memory CD4 T-cell TFH nTPM: 38.7
Samples: 4
Max nTPM: 70.9
Min nTPM: 21.2
RHH5300_R3666
31.8
RHH5236_R3608
70.9
RHH5265_R3637
30.7
RHH5208_R3579
21.2
Memory CD4 T-cell Th1 nTPM: 52.2
Samples: 4
Max nTPM: 91.5
Min nTPM: 13.5
RHH5210_R3581
13.5
RHH5302_R3668
54.7
RHH5238_R3610
91.5
RHH5267_R3639
49.2
Memory CD4 T-cell Th1/Th17 nTPM: 37.7
Samples: 4
Max nTPM: 48.0
Min nTPM: 26.3
RHH5303_R3669
33.1
RHH5211_R3582
26.3
RHH5239_R3611
43.4
RHH5268_R3640
48.0
Memory CD4 T-cell Th17 nTPM: 44.1
Samples: 4
Max nTPM: 57.1
Min nTPM: 35.3
RHH5304_R3670
57.1
RHH5212_R3583
38.0
RHH5240_R3612
46.1
RHH5269_R3641
35.3
Memory CD4 T-cell Th2 nTPM: 43.6
Samples: 4
Max nTPM: 74.8
Min nTPM: 23.2
RHH5305_R3671
74.8
RHH5213_R3584
23.2
RHH5241_R3613
34.5
RHH5270_R3642
41.9
Naive CD4 T-cell nTPM: 49.7
Samples: 4
Max nTPM: 59.9
Min nTPM: 39.8
RHH5306_R3672
57.8
RHH5214_R3585
59.9
RHH5242_R3614
41.3
RHH5271_R3643
39.8
Naive CD8 T-cell nTPM: 35.5
Samples: 4
Max nTPM: 49.9
Min nTPM: 14.0
RHH5201_R3572
14.0
RHH5229_R3601
49.9
RHH5258_R3630
29.0
RHH5287_R3659
49.2
Non-Vd2 gdTCR nTPM: 39.2
Samples: 4
Max nTPM: 49.6
Min nTPM: 28.9
RHH5235_R3607
49.6
RHH5264_R3636
37.0
RHH5207_R3578
28.9
RHH5299_R3665
41.3
T-reg nTPM: 44.5
Samples: 4
Max nTPM: 55.8
Min nTPM: 35.2
RHH5301_R3667
55.8
RHH5237_R3609
35.2
RHH5266_R3638
42.3
RHH5209_R3580
44.5
Terminal effector memory CD4 T-cell nTPM: 39.1
Samples: 2
Max nTPM: 46.6
Min nTPM: 31.6
RHH5243_R3615
46.6
RHH5272_R3644
31.6
Terminal effector memory CD8 T-cell nTPM: 48.5
Samples: 4
Max nTPM: 89.7
Min nTPM: 25.3
RHH5232_R3604
25.3
RHH5204_R3575
89.7
RHH5261_R3633
47.3
RHH5296_R3662
31.7
Vd2 gdTCR nTPM: 56.4
Samples: 4
Max nTPM: 86.6
Min nTPM: 32.2
RHH5234_R3606
32.2
RHH5206_R3577
86.6
RHH5263_R3635
43.0
RHH5298_R3664
63.9
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
