HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni
Consensus:13.3 nTPM
HPA Brain:36.3 nTPM
GTEx:13.3 nTPM
FANTOM5:34.5 Scaled Tags Per Million
Pig:21.1 nTPM
Mouse:39.8 nTPM
Allen mouse:7.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA003211
Glial cells Medium
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 36.3
Sample id Sample description nTPM
Hippocampus
nTPM: 31.1
2529 Female, age 94, left hemisphere 32.5
2148 Female, age 91, left hemisphere 32.3
2621 Female, age 67, right hemisphere 31.3
1855 Male, age 76, left hemisphere 30.6
1911 Female, age 85, right hemisphere 30.6
1898 Male, age 80, left hemisphere 29.1
Dentate gyrus
nTPM: 33.1
2531 Female, age 67, both hemispheres 37.8
2246 Female, age 85, both hemispheres 34.8
1927 Female, age 91, both hemispheres 34.2
2528 Male, age 74, both hemispheres 32.7
2010 Male, age 76, both hemispheres 30.3
2530 Female, age 94, left hemisphere 28.7
Entorhinal gyrus
nTPM: 33.8
2613 Female, age 94, left hemisphere 38.1
1787 Male, age 76, left hemisphere 36.7
2764 Male, age 80, right hemisphere 36.1
1938 Female, age 85, left hemisphere 32.6
2686 Male, age 75, right hemisphere 30.7
2117 Female, age 91, right hemisphere 28.8
Hippocampus, CA1
nTPM: 34.2
2045 Male, age 76, both hemispheres 36.1
2749 Male, age 80, left hemisphere 35.5
2082 Female, age 91, right hemisphere 35.3
1873 Female, age 85, both hemispheres 33.0
2527 Male, age 74, both hemispheres 30.9
Hippocampus, CA2
nTPM: 30.6
1892 Male, age 76, both hemispheres 32.7
2113 Female, age 91, right hemisphere 30.8
2249 Male, age 74, both hemispheres 30.5
1940 Female, age 85, left hemisphere 30.2
1963 Male, age 80, left hemisphere 29.9
2437 Female, age 94, left hemisphere 29.5
Hippocampus, CA3
nTPM: 35.7
2620 Female, age 94, left hemisphere 46.9
2137 Male, age 80, left hemisphere 38.4
2861 Female, age 67, both hemispheres 35.3
1867 Male, age 76, both hemispheres 32.3
1891 Female, age 85, both hemispheres 30.9
2436 Male, age 74, both hemispheres 30.2
Parahippocampal cortex
nTPM: 31.8
2245 Female, age 91, both hemispheres 34.0
2693 Female, age 94, both hemispheres 33.2
1850 Male, age 80, both hemispheres 32.9
1933 Female, age 85, both hemispheres 32.9
2532 Female, age 72, left hemisphere 32.7
2018 Male, age 76, both hemispheres 32.3
2250 Female, age 67, right hemisphere 31.5
2622 Female, age 67, right hemisphere 30.9
1990 Female, age 91, right hemisphere 29.8
2692 Male, age 74, both hemispheres 27.9
Perirhinal gyrus
nTPM: 36.3
1847 Female, age 91, left hemisphere 37.8
2848 Male, age 76, right hemisphere 37.8
1794 Male, age 80, right hemisphere 35.6
2521 Female, age 94, right hemisphere 35.2
1841 Female, age 85, right hemisphere 34.8
Subiculum
nTPM: 29.9
1977 Female, age 85, both hemispheres 33.7
1901 Male, age 80, both hemispheres 29.8
2729 Female, age 91, right hemisphere 29.7
2438 Female, age 94, left hemisphere 29.6
2619 Male, age 74, both hemispheres 29.5
2042 Male, age 76, both hemispheres 26.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 13.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 13.3
Samples: 197

Max nTPM: 22.2
Min nTPM: 5.8
Std nTPM: 2.8
Median nTPM: 13.1
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 22.2
GTEX-11GSP-0011-R1a-SM-9QEJ3 60-69 years, female 22.2
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 21.6
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 21.3
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 19.5
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 19.5
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 19.5
GTEX-T5JC-0011-R1A-SM-32PM6 20-29 years, male 19.1
GTEX-11ONC-0011-R1a-SM-57WD4 60-69 years, male 18.5
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 18.3
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 18.2
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 34.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 34.5
FF:10153-102I9 76 years, female 37.8
FF:10169-103B7 60 years, female 31.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 21.1
Pig sample Sample description nTPM
Subiculum
nTPM: 21.1
Samples: 4

Max nTPM: 25.4
Min nTPM: 17.5
Sample A Female 25.4
Sample B Female 19.1
Sample C Male 22.5
Sample D Male 17.5
Dorsal hippocampus
nTPM: 19.8
Samples: 4

Max nTPM: 22.1
Min nTPM: 16.3
Sample A Female 22.1
Sample B Female 21.8
Sample C Male 18.8
Sample D Male 16.3
Entorhinal cortex
nTPM: 19.8
Samples: 4

Max nTPM: 21.7
Min nTPM: 18.0
Sample A Female 21.7
Sample B Female 18.0
Sample C Male 21.2
Sample D Male 18.2
Ventral hippocampus
nTPM: 20.9
Samples: 4

Max nTPM: 26.7
Min nTPM: 16.6
Sample A Female 18.4
Sample B Female 16.6
Sample C Male 26.7
Sample D Male 22.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 39.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 38.9
Samples: 4

Max nTPM: 41.2
Min nTPM: 34.8
Sample A Male 34.8
Sample B Male 38.9
Sample C Female 40.6
Sample D Female 41.2
Hippocampal formation
nTPM: 39.8
Samples: 4

Max nTPM: 44.2
Min nTPM: 35.1
Sample A Male 42.1
Sample B Male 44.2
Sample C Female 35.1
Sample D Female 37.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 7.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.6
70598369 Antisense, RP_050407_04_G12, Mouse strain C57BL/6J (56 days, male) 7.6

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org