HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni
Consensus:58.8 nTPM
HPA Brain:60.7 nTPM
GTEx:58.8 nTPM
FANTOM5:77.5 Scaled Tags Per Million
Pig:90.0 nTPM
Mouse:109.9 nTPM
Allen mouse:11.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA054094Antibody HPA054559Antibody CAB022069
Glial cells MediumMediumMedium
Neuronal cells HighMediumHigh







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 60.7
Sample id Sample description nTPM
Hippocampus
nTPM: 60.7
2529 Female, age 94, left hemisphere 71.0
1898 Male, age 80, left hemisphere 64.2
2621 Female, age 67, right hemisphere 61.7
2148 Female, age 91, left hemisphere 60.8
1855 Male, age 76, left hemisphere 54.9
1911 Female, age 85, right hemisphere 51.7
Dentate gyrus
nTPM: 55.5
2246 Female, age 85, both hemispheres 58.5
2530 Female, age 94, left hemisphere 57.7
2010 Male, age 76, both hemispheres 56.9
2531 Female, age 67, both hemispheres 56.9
1927 Female, age 91, both hemispheres 53.4
2528 Male, age 74, both hemispheres 49.3
Entorhinal gyrus
nTPM: 57.1
2117 Female, age 91, right hemisphere 63.7
1938 Female, age 85, left hemisphere 62.8
2764 Male, age 80, right hemisphere 59.1
1787 Male, age 76, left hemisphere 57.1
2686 Male, age 75, right hemisphere 52.0
2613 Female, age 94, left hemisphere 48.2
Hippocampus, CA1
nTPM: 58.5
2749 Male, age 80, left hemisphere 64.5
2045 Male, age 76, both hemispheres 60.9
2527 Male, age 74, both hemispheres 59.8
1873 Female, age 85, both hemispheres 57.2
2082 Female, age 91, right hemisphere 50.3
Hippocampus, CA2
nTPM: 57.0
1892 Male, age 76, both hemispheres 66.5
2437 Female, age 94, left hemisphere 59.3
1940 Female, age 85, left hemisphere 56.8
1963 Male, age 80, left hemisphere 55.2
2113 Female, age 91, right hemisphere 53.0
2249 Male, age 74, both hemispheres 51.3
Hippocampus, CA3
nTPM: 57.3
1867 Male, age 76, both hemispheres 63.7
2137 Male, age 80, left hemisphere 61.4
2436 Male, age 74, both hemispheres 58.3
2861 Female, age 67, both hemispheres 57.0
1891 Female, age 85, both hemispheres 52.7
2620 Female, age 94, left hemisphere 51.0
Parahippocampal cortex
nTPM: 56.8
2245 Female, age 91, both hemispheres 62.0
2250 Female, age 67, right hemisphere 61.0
1850 Male, age 80, both hemispheres 60.5
2532 Female, age 72, left hemisphere 59.4
1990 Female, age 91, right hemisphere 56.9
2018 Male, age 76, both hemispheres 56.1
1933 Female, age 85, both hemispheres 54.2
2622 Female, age 67, right hemisphere 54.1
2692 Male, age 74, both hemispheres 53.2
2693 Female, age 94, both hemispheres 50.6
Perirhinal gyrus
nTPM: 59.5
1794 Male, age 80, right hemisphere 63.5
2521 Female, age 94, right hemisphere 58.9
2848 Male, age 76, right hemisphere 58.5
1841 Female, age 85, right hemisphere 58.4
1847 Female, age 91, left hemisphere 58.3
Subiculum
nTPM: 57.4
1977 Female, age 85, both hemispheres 61.0
2619 Male, age 74, both hemispheres 58.6
2042 Male, age 76, both hemispheres 58.5
1901 Male, age 80, both hemispheres 58.2
2438 Female, age 94, left hemisphere 57.3
2729 Female, age 91, right hemisphere 51.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 58.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 58.8
Samples: 197

Max nTPM: 78.7
Min nTPM: 45.1
Std nTPM: 5.7
Median nTPM: 58.1
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 78.7
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 72.4
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 72.2
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 72.0
GTEX-13FHO-0011-R1b-SM-5KLZG 60-69 years, male 71.9
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 71.6
GTEX-TSE9-0011-R1A-SM-3DB7E 60-69 years, female 71.2
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 70.5
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 70.1
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 70.1
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 69.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 77.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 77.5
FF:10169-103B7 60 years, female 88.2
FF:10153-102I9 76 years, female 66.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 90.0
Pig sample Sample description nTPM
Subiculum
nTPM: 81.0
Samples: 4

Max nTPM: 97.7
Min nTPM: 74.0
Sample A Female 97.7
Sample B Female 77.9
Sample C Male 74.0
Sample D Male 74.4
Dorsal hippocampus
nTPM: 90.0
Samples: 4

Max nTPM: 98.1
Min nTPM: 81.2
Sample A Female 98.1
Sample B Female 87.4
Sample C Male 93.4
Sample D Male 81.2
Entorhinal cortex
nTPM: 74.0
Samples: 4

Max nTPM: 80.2
Min nTPM: 65.0
Sample A Female 80.2
Sample B Female 78.6
Sample C Male 72.1
Sample D Male 65.0
Ventral hippocampus
nTPM: 84.0
Samples: 4

Max nTPM: 93.5
Min nTPM: 73.5
Sample A Female 82.5
Sample B Female 73.5
Sample C Male 93.5
Sample D Male 86.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 109.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 100.3
Samples: 4

Max nTPM: 112.1
Min nTPM: 90.8
Sample A Male 90.8
Sample B Male 94.4
Sample C Female 103.9
Sample D Female 112.1
Hippocampal formation
nTPM: 109.9
Samples: 4

Max nTPM: 118.0
Min nTPM: 104.3
Sample A Male 104.3
Sample B Male 112.5
Sample C Female 118.0
Sample D Female 104.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 11.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 11.5
68443166 Antisense, RP_050111_01_E03, Mouse strain C57BL/6J (56 days, male) 11.5

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