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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
128.3
nTPM
Monaco:
272.6
nTPM
Schmiedel:
342.8
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
128.3
HPA sample
nTPM
gdT-cell nTPM: 108.1
Samples: 6
Max nTPM: 126.3
Min nTPM: 92.0
P10809_1007
98.2
P10809_1022
126.3
P10809_1041
120.7
P10809_1060
92.0
P10809_1077
98.8
P10809_1098
112.5
MAIT T-cell nTPM: 120.0
Samples: 6
Max nTPM: 145.2
Min nTPM: 96.5
P10809_1006
145.2
P10809_1024
139.8
P10809_1043
120.0
P10809_1062
111.4
P10809_1083
96.5
P10809_1097
107.3
Memory CD4 T-cell nTPM: 108.1
Samples: 6
Max nTPM: 123.5
Min nTPM: 92.3
P10809_1014
103.5
P10809_1026
100.4
P10809_1045
123.5
P10809_1064
109.6
P10809_1086
92.3
P10809_1113
119.4
Memory CD8 T-cell nTPM: 106.4
Samples: 5
Max nTPM: 119.1
Min nTPM: 93.8
P10809_1012
109.3
P10809_1027
93.8
P10809_1046
113.2
P10809_1065
96.4
P10809_1111
119.1
Naive CD4 T-cell nTPM: 115.4
Samples: 6
Max nTPM: 124.8
Min nTPM: 104.4
P10809_1015
122.5
P10809_1030
104.4
P10809_1049
116.7
P10809_1068
124.8
P10809_1085
107.4
P10809_1112
116.6
Naive CD8 T-cell nTPM: 116.0
Samples: 6
Max nTPM: 134.5
Min nTPM: 93.7
P10809_1016
134.5
P10809_1031
128.2
P10809_1050
99.8
P10809_1069
121.5
P10809_1087
93.7
P10809_1110
118.0
T-reg nTPM: 128.3
Samples: 6
Max nTPM: 139.5
Min nTPM: 96.7
P10809_1018
131.4
P10809_1037
129.5
P10809_1056
134.8
P10809_1075
96.7
P10809_1094
138.0
P10809_1106
139.5
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
272.6
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 224.9
Samples: 4
Max nTPM: 256.8
Min nTPM: 187.0
RHH5202_R3573
256.8
RHH5230_R3602
251.5
RHH5259_R3631
204.4
RHH5288_R3660
187.0
Effector memory CD8 T-cell nTPM: 246.4
Samples: 4
Max nTPM: 307.6
Min nTPM: 224.1
RHH5203_R3574
307.6
RHH5231_R3603
227.0
RHH5260_R3632
226.9
RHH5289_R3661
224.1
MAIT T-cell nTPM: 228.6
Samples: 4
Max nTPM: 288.3
Min nTPM: 193.7
RHH5233_R3605
193.7
RHH5205_R3576
288.3
RHH5262_R3634
233.5
RHH5297_R3663
198.7
Memory CD4 T-cell TFH nTPM: 220.3
Samples: 4
Max nTPM: 259.5
Min nTPM: 196.3
RHH5300_R3666
201.4
RHH5236_R3608
224.1
RHH5265_R3637
196.3
RHH5208_R3579
259.5
Memory CD4 T-cell Th1 nTPM: 223.9
Samples: 4
Max nTPM: 233.8
Min nTPM: 214.0
RHH5210_R3581
233.8
RHH5302_R3668
214.0
RHH5238_R3610
214.5
RHH5267_R3639
233.3
Memory CD4 T-cell Th1/Th17 nTPM: 231.8
Samples: 4
Max nTPM: 289.8
Min nTPM: 202.2
RHH5303_R3669
202.8
RHH5211_R3582
232.3
RHH5239_R3611
289.8
RHH5268_R3640
202.2
Memory CD4 T-cell Th17 nTPM: 267.1
Samples: 4
Max nTPM: 320.3
Min nTPM: 240.7
RHH5304_R3670
262.4
RHH5212_R3583
240.7
RHH5240_R3612
320.3
RHH5269_R3641
245.0
Memory CD4 T-cell Th2 nTPM: 251.7
Samples: 4
Max nTPM: 255.5
Min nTPM: 248.1
RHH5305_R3671
248.1
RHH5213_R3584
255.5
RHH5241_R3613
249.2
RHH5270_R3642
254.1
Naive CD4 T-cell nTPM: 232.4
Samples: 4
Max nTPM: 246.1
Min nTPM: 220.7
RHH5306_R3672
231.9
RHH5214_R3585
220.7
RHH5242_R3614
246.1
RHH5271_R3643
231.0
Naive CD8 T-cell nTPM: 272.6
Samples: 4
Max nTPM: 302.2
Min nTPM: 240.7
RHH5201_R3572
302.2
RHH5229_R3601
289.3
RHH5258_R3630
240.7
RHH5287_R3659
258.0
Non-Vd2 gdTCR nTPM: 234.2
Samples: 4
Max nTPM: 269.6
Min nTPM: 188.3
RHH5235_R3607
247.9
RHH5264_R3636
230.8
RHH5207_R3578
269.6
RHH5299_R3665
188.3
T-reg nTPM: 225.9
Samples: 4
Max nTPM: 251.0
Min nTPM: 207.6
RHH5301_R3667
207.6
RHH5237_R3609
222.0
RHH5266_R3638
223.1
RHH5209_R3580
251.0
Terminal effector memory CD4 T-cell nTPM: 233.3
Samples: 2
Max nTPM: 255.6
Min nTPM: 211.0
RHH5243_R3615
255.6
RHH5272_R3644
211.0
Terminal effector memory CD8 T-cell nTPM: 228.0
Samples: 4
Max nTPM: 254.3
Min nTPM: 205.9
RHH5232_R3604
235.6
RHH5204_R3575
254.3
RHH5261_R3633
205.9
RHH5296_R3662
216.0
Vd2 gdTCR nTPM: 238.9
Samples: 4
Max nTPM: 268.1
Min nTPM: 198.0
RHH5234_R3606
239.0
RHH5206_R3577
250.3
RHH5263_R3635
268.1
RHH5298_R3664
198.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.