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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
129.7
nTPM
Monaco:
237.2
nTPM
Schmiedel:
54.2
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
129.7
HPA sample
nTPM
gdT-cell nTPM: 129.7
Samples: 6
Max nTPM: 200.2
Min nTPM: 88.2
P10809_1007
88.2
P10809_1022
117.5
P10809_1041
200.2
P10809_1060
98.2
P10809_1077
143.4
P10809_1098
130.8
MAIT T-cell nTPM: 104.7
Samples: 6
Max nTPM: 159.1
Min nTPM: 44.3
P10809_1006
44.3
P10809_1024
115.7
P10809_1043
131.0
P10809_1062
97.4
P10809_1083
80.4
P10809_1097
159.1
Memory CD4 T-cell nTPM: 90.8
Samples: 6
Max nTPM: 128.7
Min nTPM: 44.1
P10809_1014
44.1
P10809_1026
78.1
P10809_1045
85.0
P10809_1064
101.1
P10809_1086
128.7
P10809_1113
107.6
Memory CD8 T-cell nTPM: 116.7
Samples: 5
Max nTPM: 151.5
Min nTPM: 67.4
P10809_1012
67.4
P10809_1027
109.2
P10809_1046
128.1
P10809_1065
151.5
P10809_1111
127.2
Naive CD4 T-cell nTPM: 76.7
Samples: 6
Max nTPM: 109.9
Min nTPM: 34.8
P10809_1015
34.8
P10809_1030
77.7
P10809_1049
88.6
P10809_1068
64.5
P10809_1085
109.9
P10809_1112
84.9
Naive CD8 T-cell nTPM: 100.0
Samples: 6
Max nTPM: 173.1
Min nTPM: 45.0
P10809_1016
45.0
P10809_1031
71.9
P10809_1050
103.8
P10809_1069
118.1
P10809_1087
173.1
P10809_1110
88.0
T-reg nTPM: 103.4
Samples: 6
Max nTPM: 186.1
Min nTPM: 58.5
P10809_1018
58.5
P10809_1037
65.5
P10809_1056
186.1
P10809_1075
75.2
P10809_1094
125.2
P10809_1106
109.6
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
237.2
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 84.7
Samples: 4
Max nTPM: 116.0
Min nTPM: 58.7
RHH5202_R3573
116.0
RHH5230_R3602
58.7
RHH5259_R3631
63.4
RHH5288_R3660
100.5
Effector memory CD8 T-cell nTPM: 144.2
Samples: 4
Max nTPM: 178.8
Min nTPM: 105.0
RHH5203_R3574
146.0
RHH5231_R3603
178.8
RHH5260_R3632
105.0
RHH5289_R3661
147.0
MAIT T-cell nTPM: 118.0
Samples: 4
Max nTPM: 153.9
Min nTPM: 73.0
RHH5233_R3605
125.3
RHH5205_R3576
73.0
RHH5262_R3634
119.6
RHH5297_R3663
153.9
Memory CD4 T-cell TFH nTPM: 110.8
Samples: 4
Max nTPM: 159.2
Min nTPM: 68.6
RHH5300_R3666
107.1
RHH5236_R3608
159.2
RHH5265_R3637
68.6
RHH5208_R3579
108.2
Memory CD4 T-cell Th1 nTPM: 89.2
Samples: 4
Max nTPM: 164.4
Min nTPM: 59.4
RHH5210_R3581
63.6
RHH5302_R3668
164.4
RHH5238_R3610
69.3
RHH5267_R3639
59.4
Memory CD4 T-cell Th1/Th17 nTPM: 131.3
Samples: 4
Max nTPM: 219.7
Min nTPM: 57.8
RHH5303_R3669
219.7
RHH5211_R3582
175.6
RHH5239_R3611
57.8
RHH5268_R3640
72.0
Memory CD4 T-cell Th17 nTPM: 73.8
Samples: 4
Max nTPM: 114.7
Min nTPM: 43.6
RHH5304_R3670
84.5
RHH5212_R3583
114.7
RHH5240_R3612
43.6
RHH5269_R3641
52.5
Memory CD4 T-cell Th2 nTPM: 89.5
Samples: 4
Max nTPM: 98.3
Min nTPM: 69.8
RHH5305_R3671
98.3
RHH5213_R3584
94.6
RHH5241_R3613
95.4
RHH5270_R3642
69.8
Naive CD4 T-cell nTPM: 69.1
Samples: 4
Max nTPM: 90.2
Min nTPM: 46.5
RHH5306_R3672
88.7
RHH5214_R3585
90.2
RHH5242_R3614
50.8
RHH5271_R3643
46.5
Naive CD8 T-cell nTPM: 69.0
Samples: 4
Max nTPM: 91.0
Min nTPM: 51.7
RHH5201_R3572
91.0
RHH5229_R3601
51.7
RHH5258_R3630
73.7
RHH5287_R3659
59.4
Non-Vd2 gdTCR nTPM: 198.1
Samples: 4
Max nTPM: 295.0
Min nTPM: 68.9
RHH5235_R3607
68.9
RHH5264_R3636
215.1
RHH5207_R3578
213.3
RHH5299_R3665
295.0
T-reg nTPM: 91.0
Samples: 4
Max nTPM: 122.0
Min nTPM: 55.5
RHH5301_R3667
122.0
RHH5237_R3609
113.1
RHH5266_R3638
55.5
RHH5209_R3580
73.2
Terminal effector memory CD4 T-cell nTPM: 120.9
Samples: 2
Max nTPM: 151.8
Min nTPM: 90.0
RHH5243_R3615
90.0
RHH5272_R3644
151.8
Terminal effector memory CD8 T-cell nTPM: 237.2
Samples: 4
Max nTPM: 329.7
Min nTPM: 125.1
RHH5232_R3604
183.4
RHH5204_R3575
310.5
RHH5261_R3633
125.1
RHH5296_R3662
329.7
Vd2 gdTCR nTPM: 170.7
Samples: 4
Max nTPM: 295.1
Min nTPM: 100.4
RHH5234_R3606
133.8
RHH5206_R3577
295.1
RHH5263_R3635
100.4
RHH5298_R3664
153.3
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
