HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:26.3 nTPM
HPA Brain:53.7 nTPM
GTEx:26.3 nTPM
FANTOM5:34.0 Scaled Tags Per Million
Pig:49.2 nTPM
Mouse:42.9 nTPM
Allen mouse:3.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB070423
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 53.7
Sample id Sample description nTPM
Hippocampus
nTPM: 51.6
1898 Male, age 80, left hemisphere 62.1
2529 Female, age 94, left hemisphere 56.2
2621 Female, age 67, right hemisphere 53.0
1911 Female, age 85, right hemisphere 46.7
2148 Female, age 91, left hemisphere 46.1
1855 Male, age 76, left hemisphere 45.6
Dentate gyrus
nTPM: 51.4
2530 Female, age 94, left hemisphere 57.8
1927 Female, age 91, both hemispheres 55.7
2010 Male, age 76, both hemispheres 50.8
2246 Female, age 85, both hemispheres 50.1
2531 Female, age 67, both hemispheres 48.6
2528 Male, age 74, both hemispheres 45.7
Entorhinal gyrus
nTPM: 51.7
2764 Male, age 80, right hemisphere 55.6
2117 Female, age 91, right hemisphere 52.3
2686 Male, age 75, right hemisphere 51.9
1787 Male, age 76, left hemisphere 51.4
1938 Female, age 85, left hemisphere 51.4
2613 Female, age 94, left hemisphere 47.4
Hippocampus, CA1
nTPM: 51.6
2749 Male, age 80, left hemisphere 66.2
2527 Male, age 74, both hemispheres 50.8
1873 Female, age 85, both hemispheres 48.4
2082 Female, age 91, right hemisphere 46.4
2045 Male, age 76, both hemispheres 46.3
Hippocampus, CA2
nTPM: 50.5
1892 Male, age 76, both hemispheres 57.3
1963 Male, age 80, left hemisphere 54.8
2437 Female, age 94, left hemisphere 50.8
2113 Female, age 91, right hemisphere 48.6
2249 Male, age 74, both hemispheres 45.7
1940 Female, age 85, left hemisphere 45.6
Hippocampus, CA3
nTPM: 49.5
2861 Female, age 67, both hemispheres 52.2
2137 Male, age 80, left hemisphere 51.3
1891 Female, age 85, both hemispheres 50.4
1867 Male, age 76, both hemispheres 49.3
2436 Male, age 74, both hemispheres 47.5
2620 Female, age 94, left hemisphere 46.0
Parahippocampal cortex
nTPM: 50.3
1850 Male, age 80, both hemispheres 58.7
2245 Female, age 91, both hemispheres 53.8
2532 Female, age 72, left hemisphere 52.8
1933 Female, age 85, both hemispheres 52.3
1990 Female, age 91, right hemisphere 50.8
2692 Male, age 74, both hemispheres 48.5
2018 Male, age 76, both hemispheres 48.4
2693 Female, age 94, both hemispheres 47.3
2250 Female, age 67, right hemisphere 45.3
2622 Female, age 67, right hemisphere 44.7
Perirhinal gyrus
nTPM: 53.7
1794 Male, age 80, right hemisphere 63.8
1847 Female, age 91, left hemisphere 57.4
1841 Female, age 85, right hemisphere 52.3
2848 Male, age 76, right hemisphere 48.7
2521 Female, age 94, right hemisphere 46.5
Subiculum
nTPM: 50.3
2438 Female, age 94, left hemisphere 53.0
1901 Male, age 80, both hemispheres 52.9
1977 Female, age 85, both hemispheres 51.9
2619 Male, age 74, both hemispheres 50.2
2042 Male, age 76, both hemispheres 47.3
2729 Female, age 91, right hemisphere 46.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 26.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 26.3
Samples: 197

Max nTPM: 39.5
Min nTPM: 16.4
Std nTPM: 4.3
Median nTPM: 26.0
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 39.5
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 37.4
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 37.3
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 37.2
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 36.6
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 36.4
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 36.3
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 35.9
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 35.8
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 35.7
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 35.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 34.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 34.0
FF:10169-103B7 60 years, female 36.3
FF:10153-102I9 76 years, female 31.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 49.2
Pig sample Sample description nTPM
Subiculum
nTPM: 40.7
Samples: 4

Max nTPM: 47.9
Min nTPM: 36.7
Sample A Female 47.9
Sample B Female 39.3
Sample C Male 38.8
Sample D Male 36.7
Dorsal hippocampus
nTPM: 49.2
Samples: 4

Max nTPM: 58.3
Min nTPM: 41.6
Sample A Female 58.3
Sample B Female 54.0
Sample C Male 41.6
Sample D Male 42.9
Entorhinal cortex
nTPM: 43.0
Samples: 4

Max nTPM: 46.1
Min nTPM: 39.9
Sample A Female 42.5
Sample B Female 46.1
Sample C Male 43.3
Sample D Male 39.9
Ventral hippocampus
nTPM: 46.0
Samples: 4

Max nTPM: 54.3
Min nTPM: 37.3
Sample A Female 45.9
Sample B Female 37.3
Sample C Male 46.5
Sample D Male 54.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 42.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 38.0
Samples: 4

Max nTPM: 43.0
Min nTPM: 35.3
Sample A Male 35.3
Sample B Male 35.8
Sample C Female 38.0
Sample D Female 43.0
Hippocampal formation
nTPM: 42.9
Samples: 4

Max nTPM: 45.8
Min nTPM: 36.7
Sample A Male 44.3
Sample B Male 44.7
Sample C Female 45.8
Sample D Female 36.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.7
68269270 Antisense, RP_041208_02_A04, Mouse strain C57BL/6J (56 days, male) 3.7

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