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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
36.2
nTPM
Monaco:
170.5
nTPM
Schmiedel:
191.4
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
36.2
HPA sample
nTPM
gdT-cell nTPM: 26.0
Samples: 6
Max nTPM: 31.3
Min nTPM: 15.1
P10809_1007
29.7
P10809_1022
31.3
P10809_1041
15.1
P10809_1060
26.4
P10809_1077
26.6
P10809_1098
26.9
MAIT T-cell nTPM: 30.8
Samples: 6
Max nTPM: 47.2
Min nTPM: 21.7
P10809_1006
30.5
P10809_1024
47.2
P10809_1043
21.7
P10809_1062
33.3
P10809_1083
24.6
P10809_1097
27.5
Memory CD4 T-cell nTPM: 31.8
Samples: 6
Max nTPM: 39.3
Min nTPM: 27.2
P10809_1014
39.3
P10809_1026
32.2
P10809_1045
33.5
P10809_1064
30.8
P10809_1086
28.0
P10809_1113
27.2
Memory CD8 T-cell nTPM: 32.2
Samples: 5
Max nTPM: 39.2
Min nTPM: 27.1
P10809_1012
39.2
P10809_1027
36.1
P10809_1046
28.7
P10809_1065
29.8
P10809_1111
27.1
Naive CD4 T-cell nTPM: 36.2
Samples: 6
Max nTPM: 40.6
Min nTPM: 30.3
P10809_1015
37.5
P10809_1030
36.0
P10809_1049
40.0
P10809_1068
32.8
P10809_1085
40.6
P10809_1112
30.3
Naive CD8 T-cell nTPM: 30.8
Samples: 6
Max nTPM: 40.4
Min nTPM: 23.4
P10809_1016
35.5
P10809_1031
40.4
P10809_1050
26.4
P10809_1069
32.7
P10809_1087
26.6
P10809_1110
23.4
T-reg nTPM: 35.6
Samples: 6
Max nTPM: 39.1
Min nTPM: 28.7
P10809_1018
37.2
P10809_1037
39.1
P10809_1056
38.2
P10809_1075
28.7
P10809_1094
34.7
P10809_1106
35.6
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
170.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 161.9
Samples: 4
Max nTPM: 190.0
Min nTPM: 124.5
RHH5202_R3573
190.0
RHH5230_R3602
170.0
RHH5259_R3631
124.5
RHH5288_R3660
162.9
Effector memory CD8 T-cell nTPM: 164.2
Samples: 4
Max nTPM: 170.4
Min nTPM: 159.6
RHH5203_R3574
166.0
RHH5231_R3603
170.4
RHH5260_R3632
160.8
RHH5289_R3661
159.6
MAIT T-cell nTPM: 162.1
Samples: 4
Max nTPM: 187.0
Min nTPM: 134.0
RHH5233_R3605
180.3
RHH5205_R3576
187.0
RHH5262_R3634
146.9
RHH5297_R3663
134.0
Memory CD4 T-cell TFH nTPM: 166.1
Samples: 4
Max nTPM: 221.2
Min nTPM: 137.9
RHH5300_R3666
137.9
RHH5236_R3608
221.2
RHH5265_R3637
151.7
RHH5208_R3579
153.4
Memory CD4 T-cell Th1 nTPM: 128.5
Samples: 4
Max nTPM: 134.4
Min nTPM: 120.6
RHH5210_R3581
134.4
RHH5302_R3668
133.5
RHH5238_R3610
120.6
RHH5267_R3639
125.5
Memory CD4 T-cell Th1/Th17 nTPM: 170.5
Samples: 4
Max nTPM: 177.0
Min nTPM: 157.8
RHH5303_R3669
177.0
RHH5211_R3582
172.9
RHH5239_R3611
157.8
RHH5268_R3640
174.4
Memory CD4 T-cell Th17 nTPM: 158.2
Samples: 4
Max nTPM: 170.1
Min nTPM: 136.9
RHH5304_R3670
160.4
RHH5212_R3583
136.9
RHH5240_R3612
165.3
RHH5269_R3641
170.1
Memory CD4 T-cell Th2 nTPM: 140.7
Samples: 4
Max nTPM: 161.3
Min nTPM: 108.5
RHH5305_R3671
108.5
RHH5213_R3584
154.4
RHH5241_R3613
138.6
RHH5270_R3642
161.3
Naive CD4 T-cell nTPM: 164.4
Samples: 4
Max nTPM: 178.9
Min nTPM: 140.5
RHH5306_R3672
176.1
RHH5214_R3585
162.0
RHH5242_R3614
140.5
RHH5271_R3643
178.9
Naive CD8 T-cell nTPM: 168.2
Samples: 4
Max nTPM: 185.3
Min nTPM: 143.3
RHH5201_R3572
185.3
RHH5229_R3601
143.3
RHH5258_R3630
169.5
RHH5287_R3659
174.5
Non-Vd2 gdTCR nTPM: 141.1
Samples: 4
Max nTPM: 191.6
Min nTPM: 106.4
RHH5235_R3607
113.6
RHH5264_R3636
191.6
RHH5207_R3578
152.6
RHH5299_R3665
106.4
T-reg nTPM: 147.3
Samples: 4
Max nTPM: 160.1
Min nTPM: 125.4
RHH5301_R3667
125.4
RHH5237_R3609
160.1
RHH5266_R3638
157.5
RHH5209_R3580
146.1
Terminal effector memory CD4 T-cell nTPM: 164.1
Samples: 2
Max nTPM: 167.5
Min nTPM: 160.7
RHH5243_R3615
167.5
RHH5272_R3644
160.7
Terminal effector memory CD8 T-cell nTPM: 133.4
Samples: 4
Max nTPM: 152.2
Min nTPM: 110.7
RHH5232_R3604
143.1
RHH5204_R3575
127.5
RHH5261_R3633
152.2
RHH5296_R3662
110.7
Vd2 gdTCR nTPM: 162.0
Samples: 4
Max nTPM: 198.5
Min nTPM: 134.0
RHH5234_R3606
171.4
RHH5206_R3577
144.0
RHH5263_R3635
198.5
RHH5298_R3664
134.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
