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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
232.6
nTPM
Monaco:
477.8
nTPM
Schmiedel:
370.2
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
232.6
HPA sample
nTPM
gdT-cell nTPM: 142.4
Samples: 6
Max nTPM: 183.2
Min nTPM: 104.0
P10809_1007
104.0
P10809_1022
183.2
P10809_1041
142.1
P10809_1060
147.7
P10809_1077
129.1
P10809_1098
148.2
MAIT T-cell nTPM: 199.9
Samples: 6
Max nTPM: 280.0
Min nTPM: 154.0
P10809_1006
175.1
P10809_1024
280.0
P10809_1043
175.6
P10809_1062
167.0
P10809_1083
154.0
P10809_1097
247.8
Memory CD4 T-cell nTPM: 185.3
Samples: 6
Max nTPM: 223.3
Min nTPM: 155.2
P10809_1014
157.1
P10809_1026
198.6
P10809_1045
223.3
P10809_1064
155.2
P10809_1086
174.9
P10809_1113
202.5
Memory CD8 T-cell nTPM: 170.3
Samples: 5
Max nTPM: 202.8
Min nTPM: 150.3
P10809_1012
150.3
P10809_1027
185.1
P10809_1046
157.7
P10809_1065
155.8
P10809_1111
202.8
Naive CD4 T-cell nTPM: 232.6
Samples: 6
Max nTPM: 282.5
Min nTPM: 172.5
P10809_1015
172.5
P10809_1030
282.5
P10809_1049
248.3
P10809_1068
217.4
P10809_1085
235.3
P10809_1112
239.3
Naive CD8 T-cell nTPM: 193.1
Samples: 6
Max nTPM: 266.5
Min nTPM: 144.4
P10809_1016
163.3
P10809_1031
266.5
P10809_1050
186.2
P10809_1069
178.3
P10809_1087
144.4
P10809_1110
219.9
T-reg nTPM: 204.4
Samples: 6
Max nTPM: 233.7
Min nTPM: 162.4
P10809_1018
162.4
P10809_1037
233.7
P10809_1056
226.8
P10809_1075
171.0
P10809_1094
212.1
P10809_1106
220.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
477.8
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 406.9
Samples: 4
Max nTPM: 472.6
Min nTPM: 361.1
RHH5202_R3573
472.6
RHH5230_R3602
409.1
RHH5259_R3631
384.8
RHH5288_R3660
361.1
Effector memory CD8 T-cell nTPM: 408.6
Samples: 4
Max nTPM: 435.8
Min nTPM: 377.5
RHH5203_R3574
389.2
RHH5231_R3603
377.5
RHH5260_R3632
431.8
RHH5289_R3661
435.8
MAIT T-cell nTPM: 429.1
Samples: 4
Max nTPM: 467.0
Min nTPM: 350.2
RHH5233_R3605
467.0
RHH5205_R3576
459.4
RHH5262_R3634
439.9
RHH5297_R3663
350.2
Memory CD4 T-cell TFH nTPM: 438.7
Samples: 4
Max nTPM: 542.3
Min nTPM: 378.7
RHH5300_R3666
378.7
RHH5236_R3608
542.3
RHH5265_R3637
381.6
RHH5208_R3579
452.1
Memory CD4 T-cell Th1 nTPM: 407.0
Samples: 4
Max nTPM: 455.2
Min nTPM: 370.5
RHH5210_R3581
455.2
RHH5302_R3668
370.5
RHH5238_R3610
426.9
RHH5267_R3639
375.2
Memory CD4 T-cell Th1/Th17 nTPM: 449.6
Samples: 4
Max nTPM: 517.3
Min nTPM: 340.1
RHH5303_R3669
479.7
RHH5211_R3582
517.3
RHH5239_R3611
461.2
RHH5268_R3640
340.1
Memory CD4 T-cell Th17 nTPM: 458.4
Samples: 4
Max nTPM: 561.6
Min nTPM: 354.8
RHH5304_R3670
519.8
RHH5212_R3583
397.4
RHH5240_R3612
561.6
RHH5269_R3641
354.8
Memory CD4 T-cell Th2 nTPM: 436.7
Samples: 4
Max nTPM: 507.0
Min nTPM: 352.2
RHH5305_R3671
420.2
RHH5213_R3584
507.0
RHH5241_R3613
467.4
RHH5270_R3642
352.2
Naive CD4 T-cell nTPM: 477.8
Samples: 4
Max nTPM: 521.7
Min nTPM: 441.3
RHH5306_R3672
442.5
RHH5214_R3585
505.5
RHH5242_R3614
521.7
RHH5271_R3643
441.3
Naive CD8 T-cell nTPM: 470.0
Samples: 4
Max nTPM: 553.0
Min nTPM: 373.0
RHH5201_R3572
553.0
RHH5229_R3601
531.5
RHH5258_R3630
373.0
RHH5287_R3659
422.6
Non-Vd2 gdTCR nTPM: 326.2
Samples: 4
Max nTPM: 397.3
Min nTPM: 231.9
RHH5235_R3607
397.3
RHH5264_R3636
337.5
RHH5207_R3578
338.2
RHH5299_R3665
231.9
T-reg nTPM: 452.9
Samples: 4
Max nTPM: 553.9
Min nTPM: 341.6
RHH5301_R3667
341.6
RHH5237_R3609
553.9
RHH5266_R3638
379.7
RHH5209_R3580
536.4
Terminal effector memory CD4 T-cell nTPM: 360.7
Samples: 2
Max nTPM: 385.1
Min nTPM: 336.2
RHH5243_R3615
385.1
RHH5272_R3644
336.2
Terminal effector memory CD8 T-cell nTPM: 340.5
Samples: 4
Max nTPM: 365.3
Min nTPM: 312.5
RHH5232_R3604
358.9
RHH5204_R3575
312.5
RHH5261_R3633
325.3
RHH5296_R3662
365.3
Vd2 gdTCR nTPM: 417.9
Samples: 4
Max nTPM: 491.0
Min nTPM: 346.5
RHH5234_R3606
436.0
RHH5206_R3577
397.9
RHH5263_R3635
491.0
RHH5298_R3664
346.5
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.