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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
14.2
nTPM
Monaco:
16.1
nTPM
Schmiedel:
49.8
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
14.2
HPA sample
nTPM
gdT-cell nTPM: 11.7
Samples: 6
Max nTPM: 15.2
Min nTPM: 9.5
P10809_1007
9.5
P10809_1022
11.8
P10809_1041
13.2
P10809_1060
10.2
P10809_1077
10.4
P10809_1098
15.2
MAIT T-cell nTPM: 14.2
Samples: 6
Max nTPM: 21.2
Min nTPM: 11.2
P10809_1006
12.0
P10809_1024
21.2
P10809_1043
14.0
P10809_1062
14.6
P10809_1083
12.0
P10809_1097
11.2
Memory CD4 T-cell nTPM: 11.5
Samples: 6
Max nTPM: 15.7
Min nTPM: 9.5
P10809_1014
10.1
P10809_1026
15.7
P10809_1045
10.9
P10809_1064
9.5
P10809_1086
11.2
P10809_1113
11.6
Memory CD8 T-cell nTPM: 13.1
Samples: 5
Max nTPM: 20.2
Min nTPM: 9.6
P10809_1012
10.1
P10809_1027
20.2
P10809_1046
15.4
P10809_1065
9.6
P10809_1111
10.1
Naive CD4 T-cell nTPM: 12.3
Samples: 6
Max nTPM: 17.4
Min nTPM: 9.7
P10809_1015
9.7
P10809_1030
12.0
P10809_1049
17.4
P10809_1068
12.0
P10809_1085
12.7
P10809_1112
9.8
Naive CD8 T-cell nTPM: 12.6
Samples: 6
Max nTPM: 21.1
Min nTPM: 9.3
P10809_1016
10.9
P10809_1031
21.1
P10809_1050
10.8
P10809_1069
11.7
P10809_1087
11.6
P10809_1110
9.3
T-reg nTPM: 10.6
Samples: 6
Max nTPM: 21.9
Min nTPM: 0.0
P10809_1018
11.1
P10809_1037
21.9
P10809_1056
0.0
P10809_1075
11.3
P10809_1094
7.0
P10809_1106
12.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
16.1
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 13.3
Samples: 4
Max nTPM: 18.5
Min nTPM: 9.6
RHH5202_R3573
18.5
RHH5230_R3602
12.9
RHH5259_R3631
9.6
RHH5288_R3660
12.2
Effector memory CD8 T-cell nTPM: 9.4
Samples: 4
Max nTPM: 14.8
Min nTPM: 5.2
RHH5203_R3574
14.8
RHH5231_R3603
7.5
RHH5260_R3632
5.2
RHH5289_R3661
9.9
MAIT T-cell nTPM: 11.9
Samples: 4
Max nTPM: 21.5
Min nTPM: 7.9
RHH5233_R3605
8.9
RHH5205_R3576
7.9
RHH5262_R3634
9.3
RHH5297_R3663
21.5
Memory CD4 T-cell TFH nTPM: 12.8
Samples: 4
Max nTPM: 20.0
Min nTPM: 9.2
RHH5300_R3666
12.5
RHH5236_R3608
20.0
RHH5265_R3637
9.3
RHH5208_R3579
9.2
Memory CD4 T-cell Th1 nTPM: 9.5
Samples: 4
Max nTPM: 11.5
Min nTPM: 6.5
RHH5210_R3581
6.5
RHH5302_R3668
11.5
RHH5238_R3610
8.5
RHH5267_R3639
11.4
Memory CD4 T-cell Th1/Th17 nTPM: 10.2
Samples: 4
Max nTPM: 15.0
Min nTPM: 5.9
RHH5303_R3669
15.0
RHH5211_R3582
14.0
RHH5239_R3611
5.9
RHH5268_R3640
5.9
Memory CD4 T-cell Th17 nTPM: 9.3
Samples: 4
Max nTPM: 11.6
Min nTPM: 6.9
RHH5304_R3670
11.6
RHH5212_R3583
10.0
RHH5240_R3612
8.5
RHH5269_R3641
6.9
Memory CD4 T-cell Th2 nTPM: 12.1
Samples: 4
Max nTPM: 15.3
Min nTPM: 10.4
RHH5305_R3671
11.4
RHH5213_R3584
10.4
RHH5241_R3613
15.3
RHH5270_R3642
11.2
Naive CD4 T-cell nTPM: 9.4
Samples: 4
Max nTPM: 12.2
Min nTPM: 6.7
RHH5306_R3672
12.2
RHH5214_R3585
11.7
RHH5242_R3614
6.7
RHH5271_R3643
6.8
Naive CD8 T-cell nTPM: 11.2
Samples: 4
Max nTPM: 13.5
Min nTPM: 10.1
RHH5201_R3572
10.8
RHH5229_R3601
10.3
RHH5258_R3630
13.5
RHH5287_R3659
10.1
Non-Vd2 gdTCR nTPM: 9.9
Samples: 4
Max nTPM: 12.3
Min nTPM: 6.9
RHH5235_R3607
8.7
RHH5264_R3636
6.9
RHH5207_R3578
11.8
RHH5299_R3665
12.3
T-reg nTPM: 9.5
Samples: 4
Max nTPM: 13.5
Min nTPM: 6.4
RHH5301_R3667
9.6
RHH5237_R3609
13.5
RHH5266_R3638
6.4
RHH5209_R3580
8.6
Terminal effector memory CD4 T-cell nTPM: 12.0
Samples: 2
Max nTPM: 16.7
Min nTPM: 7.3
RHH5243_R3615
7.3
RHH5272_R3644
16.7
Terminal effector memory CD8 T-cell nTPM: 16.2
Samples: 4
Max nTPM: 22.5
Min nTPM: 10.3
RHH5232_R3604
15.6
RHH5204_R3575
22.5
RHH5261_R3633
10.3
RHH5296_R3662
16.2
Vd2 gdTCR nTPM: 14.8
Samples: 4
Max nTPM: 20.4
Min nTPM: 8.9
RHH5234_R3606
8.9
RHH5206_R3577
15.2
RHH5263_R3635
14.6
RHH5298_R3664
20.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
