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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
9024.8
nTPM
Monaco:
2715.6
nTPM
Schmiedel:
1116.0
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
9024.8
HPA sample
nTPM
gdT-cell nTPM: 4554.5
Samples: 6
Max nTPM: 5513.4
Min nTPM: 3140.2
P10809_1007
5513.4
P10809_1022
4656.8
P10809_1041
5285.5
P10809_1060
3140.2
P10809_1077
3854.0
P10809_1098
4877.1
MAIT T-cell nTPM: 7792.4
Samples: 6
Max nTPM: 9524.6
Min nTPM: 5933.6
P10809_1006
7690.1
P10809_1024
8447.4
P10809_1043
7838.3
P10809_1062
7320.6
P10809_1083
5933.6
P10809_1097
9524.6
Memory CD4 T-cell nTPM: 7559.0
Samples: 6
Max nTPM: 9012.5
Min nTPM: 5544.6
P10809_1014
9012.5
P10809_1026
8467.1
P10809_1045
8308.1
P10809_1064
6070.2
P10809_1086
5544.6
P10809_1113
7951.7
Memory CD8 T-cell nTPM: 5654.8
Samples: 5
Max nTPM: 6814.8
Min nTPM: 4559.5
P10809_1012
6814.8
P10809_1027
5022.9
P10809_1046
6528.2
P10809_1065
4559.5
P10809_1111
5348.8
Naive CD4 T-cell nTPM: 9024.8
Samples: 6
Max nTPM: 11286.9
Min nTPM: 6599.8
P10809_1015
9655.6
P10809_1030
9265.4
P10809_1049
11286.9
P10809_1068
8797.9
P10809_1085
6599.8
P10809_1112
8543.2
Naive CD8 T-cell nTPM: 7013.1
Samples: 6
Max nTPM: 10700.3
Min nTPM: 3946.3
P10809_1016
10700.3
P10809_1031
6944.8
P10809_1050
6688.3
P10809_1069
6083.2
P10809_1087
3946.3
P10809_1110
7715.9
T-reg nTPM: 5925.4
Samples: 6
Max nTPM: 6742.4
Min nTPM: 5393.1
P10809_1018
5817.3
P10809_1037
5569.9
P10809_1056
6742.4
P10809_1075
5938.2
P10809_1094
5393.1
P10809_1106
6091.5
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
2715.6
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 1680.8
Samples: 4
Max nTPM: 2375.6
Min nTPM: 1090.8
RHH5202_R3573
1090.8
RHH5230_R3602
1637.6
RHH5259_R3631
1619.1
RHH5288_R3660
2375.6
Effector memory CD8 T-cell nTPM: 772.7
Samples: 4
Max nTPM: 1159.4
Min nTPM: 577.0
RHH5203_R3574
594.1
RHH5231_R3603
760.4
RHH5260_R3632
1159.4
RHH5289_R3661
577.0
MAIT T-cell nTPM: 1811.8
Samples: 4
Max nTPM: 2801.3
Min nTPM: 1390.4
RHH5233_R3605
1416.3
RHH5205_R3576
1390.4
RHH5262_R3634
1639.1
RHH5297_R3663
2801.3
Memory CD4 T-cell TFH nTPM: 2068.4
Samples: 4
Max nTPM: 3136.7
Min nTPM: 1463.8
RHH5300_R3666
2080.2
RHH5236_R3608
3136.7
RHH5265_R3637
1463.8
RHH5208_R3579
1593.0
Memory CD4 T-cell Th1 nTPM: 2401.1
Samples: 4
Max nTPM: 3879.4
Min nTPM: 1371.6
RHH5210_R3581
1371.6
RHH5302_R3668
3879.4
RHH5238_R3610
2598.1
RHH5267_R3639
1755.4
Memory CD4 T-cell Th1/Th17 nTPM: 2169.2
Samples: 4
Max nTPM: 2892.1
Min nTPM: 1806.9
RHH5303_R3669
2892.1
RHH5211_R3582
1806.9
RHH5239_R3611
1818.6
RHH5268_R3640
2159.3
Memory CD4 T-cell Th17 nTPM: 1936.1
Samples: 4
Max nTPM: 2571.4
Min nTPM: 1511.7
RHH5304_R3670
2571.4
RHH5212_R3583
2034.7
RHH5240_R3612
1626.4
RHH5269_R3641
1511.7
Memory CD4 T-cell Th2 nTPM: 2167.2
Samples: 4
Max nTPM: 3055.9
Min nTPM: 1545.5
RHH5305_R3671
3055.9
RHH5213_R3584
1654.9
RHH5241_R3613
2412.3
RHH5270_R3642
1545.5
Naive CD4 T-cell nTPM: 2715.6
Samples: 4
Max nTPM: 3429.9
Min nTPM: 2050.8
RHH5306_R3672
3197.4
RHH5214_R3585
3429.9
RHH5242_R3614
2184.1
RHH5271_R3643
2050.8
Naive CD8 T-cell nTPM: 2233.5
Samples: 4
Max nTPM: 2566.4
Min nTPM: 1558.6
RHH5201_R3572
1558.6
RHH5229_R3601
2401.1
RHH5258_R3630
2407.7
RHH5287_R3659
2566.4
Non-Vd2 gdTCR nTPM: 1125.5
Samples: 4
Max nTPM: 1749.2
Min nTPM: 748.7
RHH5235_R3607
921.2
RHH5264_R3636
1083.0
RHH5207_R3578
748.7
RHH5299_R3665
1749.2
T-reg nTPM: 2151.0
Samples: 4
Max nTPM: 3268.2
Min nTPM: 1616.8
RHH5301_R3667
3268.2
RHH5237_R3609
1811.8
RHH5266_R3638
1616.8
RHH5209_R3580
1907.2
Terminal effector memory CD4 T-cell nTPM: 1136.3
Samples: 2
Max nTPM: 1327.2
Min nTPM: 945.3
RHH5243_R3615
945.3
RHH5272_R3644
1327.2
Terminal effector memory CD8 T-cell nTPM: 1487.4
Samples: 4
Max nTPM: 2621.6
Min nTPM: 746.1
RHH5232_R3604
746.1
RHH5204_R3575
2621.6
RHH5261_R3633
1336.9
RHH5296_R3662
1244.9
Vd2 gdTCR nTPM: 2096.5
Samples: 4
Max nTPM: 3072.8
Min nTPM: 1257.8
RHH5234_R3606
1257.8
RHH5206_R3577
2500.4
RHH5263_R3635
1555.1
RHH5298_R3664
3072.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.