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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
58.0
nTPM
Monaco:
111.2
nTPM
Schmiedel:
127.7
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
58.0
HPA sample
nTPM
gdT-cell nTPM: 4.5
Samples: 6
Max nTPM: 14.1
Min nTPM: 0.0
P10809_1007
7.6
P10809_1022
0.8
P10809_1041
0.0
P10809_1060
3.8
P10809_1077
14.1
P10809_1098
0.6
MAIT T-cell nTPM: 0.5
Samples: 6
Max nTPM: 1.4
Min nTPM: 0.0
P10809_1006
1.1
P10809_1024
0.0
P10809_1043
0.7
P10809_1062
0.0
P10809_1083
1.4
P10809_1097
0.0
Memory CD4 T-cell nTPM: 21.7
Samples: 6
Max nTPM: 31.2
Min nTPM: 15.1
P10809_1014
20.2
P10809_1026
31.2
P10809_1045
29.5
P10809_1064
15.1
P10809_1086
15.3
P10809_1113
18.6
Memory CD8 T-cell nTPM: 7.0
Samples: 5
Max nTPM: 15.7
Min nTPM: 0.8
P10809_1012
15.7
P10809_1027
0.8
P10809_1046
4.2
P10809_1065
7.3
P10809_1111
7.1
Naive CD4 T-cell nTPM: 37.4
Samples: 6
Max nTPM: 52.4
Min nTPM: 31.3
P10809_1015
33.6
P10809_1030
39.0
P10809_1049
34.3
P10809_1068
52.4
P10809_1085
31.3
P10809_1112
33.5
Naive CD8 T-cell nTPM: 9.6
Samples: 6
Max nTPM: 13.2
Min nTPM: 3.6
P10809_1016
13.2
P10809_1031
3.6
P10809_1050
5.6
P10809_1069
13.2
P10809_1087
8.9
P10809_1110
12.8
T-reg nTPM: 58.0
Samples: 6
Max nTPM: 71.8
Min nTPM: 46.3
P10809_1018
50.4
P10809_1037
46.3
P10809_1056
71.8
P10809_1075
52.8
P10809_1094
69.4
P10809_1106
57.5
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
111.2
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 24.9
Samples: 4
Max nTPM: 36.8
Min nTPM: 11.6
RHH5202_R3573
11.6
RHH5230_R3602
15.3
RHH5259_R3631
36.8
RHH5288_R3660
35.8
Effector memory CD8 T-cell nTPM: 21.4
Samples: 4
Max nTPM: 28.3
Min nTPM: 13.5
RHH5203_R3574
13.5
RHH5231_R3603
21.5
RHH5260_R3632
22.4
RHH5289_R3661
28.3
MAIT T-cell nTPM: 1.7
Samples: 4
Max nTPM: 3.3
Min nTPM: 0.5
RHH5233_R3605
3.3
RHH5205_R3576
1.5
RHH5262_R3634
0.5
RHH5297_R3663
1.3
Memory CD4 T-cell TFH nTPM: 27.6
Samples: 4
Max nTPM: 33.2
Min nTPM: 24.4
RHH5300_R3666
25.7
RHH5236_R3608
33.2
RHH5265_R3637
26.9
RHH5208_R3579
24.4
Memory CD4 T-cell Th1 nTPM: 72.6
Samples: 4
Max nTPM: 94.9
Min nTPM: 49.2
RHH5210_R3581
94.9
RHH5302_R3668
62.6
RHH5238_R3610
83.5
RHH5267_R3639
49.2
Memory CD4 T-cell Th1/Th17 nTPM: 39.1
Samples: 4
Max nTPM: 45.1
Min nTPM: 31.8
RHH5303_R3669
38.4
RHH5211_R3582
41.0
RHH5239_R3611
45.1
RHH5268_R3640
31.8
Memory CD4 T-cell Th17 nTPM: 68.3
Samples: 4
Max nTPM: 90.9
Min nTPM: 45.1
RHH5304_R3670
45.1
RHH5212_R3583
69.7
RHH5240_R3612
90.9
RHH5269_R3641
67.5
Memory CD4 T-cell Th2 nTPM: 111.2
Samples: 4
Max nTPM: 132.3
Min nTPM: 92.2
RHH5305_R3671
107.6
RHH5213_R3584
132.3
RHH5241_R3613
112.7
RHH5270_R3642
92.2
Naive CD4 T-cell nTPM: 96.1
Samples: 4
Max nTPM: 105.9
Min nTPM: 87.0
RHH5306_R3672
87.0
RHH5214_R3585
95.8
RHH5242_R3614
105.9
RHH5271_R3643
95.7
Naive CD8 T-cell nTPM: 30.0
Samples: 4
Max nTPM: 34.4
Min nTPM: 26.2
RHH5201_R3572
34.4
RHH5229_R3601
27.6
RHH5258_R3630
26.2
RHH5287_R3659
31.8
Non-Vd2 gdTCR nTPM: 13.3
Samples: 4
Max nTPM: 37.4
Min nTPM: 2.0
RHH5235_R3607
9.5
RHH5264_R3636
2.0
RHH5207_R3578
37.4
RHH5299_R3665
4.2
T-reg nTPM: 89.6
Samples: 4
Max nTPM: 113.9
Min nTPM: 74.3
RHH5301_R3667
74.3
RHH5237_R3609
113.9
RHH5266_R3638
85.6
RHH5209_R3580
84.7
Terminal effector memory CD4 T-cell nTPM: 13.0
Samples: 2
Max nTPM: 16.3
Min nTPM: 9.6
RHH5243_R3615
9.6
RHH5272_R3644
16.3
Terminal effector memory CD8 T-cell nTPM: 11.9
Samples: 4
Max nTPM: 20.7
Min nTPM: 5.4
RHH5232_R3604
5.4
RHH5204_R3575
9.0
RHH5261_R3633
20.7
RHH5296_R3662
12.5
Vd2 gdTCR nTPM: 7.1
Samples: 4
Max nTPM: 16.5
Min nTPM: 2.6
RHH5234_R3606
2.6
RHH5206_R3577
16.5
RHH5263_R3635
4.6
RHH5298_R3664
4.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
