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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
73.2
nTPM
Monaco:
95.7
nTPM
Schmiedel:
69.3
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
73.2
HPA sample
nTPM
gdT-cell nTPM: 53.1
Samples: 6
Max nTPM: 71.4
Min nTPM: 31.0
P10809_1007
31.0
P10809_1022
71.4
P10809_1041
61.3
P10809_1060
46.5
P10809_1077
55.9
P10809_1098
52.4
MAIT T-cell nTPM: 57.8
Samples: 6
Max nTPM: 75.8
Min nTPM: 38.8
P10809_1006
38.8
P10809_1024
75.8
P10809_1043
60.4
P10809_1062
51.7
P10809_1083
62.3
P10809_1097
58.0
Memory CD4 T-cell nTPM: 54.2
Samples: 6
Max nTPM: 63.2
Min nTPM: 33.2
P10809_1014
33.2
P10809_1026
60.9
P10809_1045
60.0
P10809_1064
47.8
P10809_1086
63.2
P10809_1113
60.3
Memory CD8 T-cell nTPM: 56.8
Samples: 5
Max nTPM: 66.9
Min nTPM: 40.4
P10809_1012
40.4
P10809_1027
60.3
P10809_1046
55.9
P10809_1065
66.9
P10809_1111
60.7
Naive CD4 T-cell nTPM: 54.6
Samples: 6
Max nTPM: 70.7
Min nTPM: 27.9
P10809_1015
27.9
P10809_1030
54.9
P10809_1049
67.4
P10809_1068
52.7
P10809_1085
70.7
P10809_1112
53.9
Naive CD8 T-cell nTPM: 53.9
Samples: 6
Max nTPM: 74.0
Min nTPM: 25.7
P10809_1016
25.7
P10809_1031
74.0
P10809_1050
50.4
P10809_1069
61.3
P10809_1087
61.3
P10809_1110
50.6
T-reg nTPM: 73.2
Samples: 6
Max nTPM: 102.3
Min nTPM: 41.1
P10809_1018
41.1
P10809_1037
84.1
P10809_1056
102.3
P10809_1075
64.8
P10809_1094
80.5
P10809_1106
66.5
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
95.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 67.5
Samples: 4
Max nTPM: 76.8
Min nTPM: 57.8
RHH5202_R3573
57.8
RHH5230_R3602
66.6
RHH5259_R3631
76.8
RHH5288_R3660
68.8
Effector memory CD8 T-cell nTPM: 95.7
Samples: 4
Max nTPM: 112.0
Min nTPM: 74.9
RHH5203_R3574
101.8
RHH5231_R3603
74.9
RHH5260_R3632
94.0
RHH5289_R3661
112.0
MAIT T-cell nTPM: 72.7
Samples: 4
Max nTPM: 80.3
Min nTPM: 61.9
RHH5233_R3605
70.8
RHH5205_R3576
80.3
RHH5262_R3634
77.9
RHH5297_R3663
61.9
Memory CD4 T-cell TFH nTPM: 72.6
Samples: 4
Max nTPM: 91.9
Min nTPM: 55.4
RHH5300_R3666
64.7
RHH5236_R3608
91.9
RHH5265_R3637
78.3
RHH5208_R3579
55.4
Memory CD4 T-cell Th1 nTPM: 57.9
Samples: 4
Max nTPM: 72.5
Min nTPM: 43.7
RHH5210_R3581
63.6
RHH5302_R3668
51.9
RHH5238_R3610
43.7
RHH5267_R3639
72.5
Memory CD4 T-cell Th1/Th17 nTPM: 73.6
Samples: 4
Max nTPM: 82.9
Min nTPM: 65.6
RHH5303_R3669
82.9
RHH5211_R3582
65.6
RHH5239_R3611
74.4
RHH5268_R3640
71.6
Memory CD4 T-cell Th17 nTPM: 66.8
Samples: 4
Max nTPM: 73.2
Min nTPM: 51.3
RHH5304_R3670
73.2
RHH5212_R3583
51.3
RHH5240_R3612
71.3
RHH5269_R3641
71.5
Memory CD4 T-cell Th2 nTPM: 64.4
Samples: 4
Max nTPM: 80.4
Min nTPM: 52.4
RHH5305_R3671
52.4
RHH5213_R3584
55.6
RHH5241_R3613
69.3
RHH5270_R3642
80.4
Naive CD4 T-cell nTPM: 63.1
Samples: 4
Max nTPM: 86.2
Min nTPM: 39.3
RHH5306_R3672
70.5
RHH5214_R3585
39.3
RHH5242_R3614
56.5
RHH5271_R3643
86.2
Naive CD8 T-cell nTPM: 69.6
Samples: 4
Max nTPM: 86.6
Min nTPM: 54.2
RHH5201_R3572
54.2
RHH5229_R3601
86.6
RHH5258_R3630
66.7
RHH5287_R3659
70.7
Non-Vd2 gdTCR nTPM: 73.3
Samples: 4
Max nTPM: 89.1
Min nTPM: 61.9
RHH5235_R3607
77.1
RHH5264_R3636
89.1
RHH5207_R3578
65.0
RHH5299_R3665
61.9
T-reg nTPM: 74.5
Samples: 4
Max nTPM: 90.8
Min nTPM: 62.8
RHH5301_R3667
67.7
RHH5237_R3609
76.8
RHH5266_R3638
90.8
RHH5209_R3580
62.8
Terminal effector memory CD4 T-cell nTPM: 95.1
Samples: 2
Max nTPM: 105.5
Min nTPM: 84.6
RHH5243_R3615
105.5
RHH5272_R3644
84.6
Terminal effector memory CD8 T-cell nTPM: 80.8
Samples: 4
Max nTPM: 105.7
Min nTPM: 55.7
RHH5232_R3604
100.6
RHH5204_R3575
55.7
RHH5261_R3633
105.7
RHH5296_R3662
61.2
Vd2 gdTCR nTPM: 68.5
Samples: 4
Max nTPM: 87.7
Min nTPM: 49.7
RHH5234_R3606
56.8
RHH5206_R3577
79.7
RHH5263_R3635
87.7
RHH5298_R3664
49.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
