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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
47.1
nTPM
Monaco:
81.8
nTPM
Schmiedel:
22.1
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
47.1
HPA sample
nTPM
gdT-cell nTPM: 34.6
Samples: 6
Max nTPM: 50.5
Min nTPM: 20.5
P10809_1007
24.0
P10809_1022
40.1
P10809_1041
50.5
P10809_1060
28.8
P10809_1077
20.5
P10809_1098
43.4
MAIT T-cell nTPM: 34.7
Samples: 6
Max nTPM: 48.4
Min nTPM: 23.8
P10809_1006
25.7
P10809_1024
47.8
P10809_1043
37.4
P10809_1062
24.8
P10809_1083
23.8
P10809_1097
48.4
Memory CD4 T-cell nTPM: 33.9
Samples: 6
Max nTPM: 44.2
Min nTPM: 21.7
P10809_1014
21.7
P10809_1026
39.0
P10809_1045
30.3
P10809_1064
37.8
P10809_1086
30.4
P10809_1113
44.2
Memory CD8 T-cell nTPM: 26.9
Samples: 5
Max nTPM: 35.8
Min nTPM: 21.6
P10809_1012
24.2
P10809_1027
21.6
P10809_1046
35.8
P10809_1065
24.1
P10809_1111
28.8
Naive CD4 T-cell nTPM: 33.5
Samples: 6
Max nTPM: 42.5
Min nTPM: 21.1
P10809_1015
21.1
P10809_1030
31.5
P10809_1049
42.5
P10809_1068
31.4
P10809_1085
36.3
P10809_1112
38.1
Naive CD8 T-cell nTPM: 28.8
Samples: 6
Max nTPM: 35.9
Min nTPM: 16.1
P10809_1016
16.1
P10809_1031
32.9
P10809_1050
28.8
P10809_1069
35.9
P10809_1087
28.4
P10809_1110
30.6
T-reg nTPM: 47.1
Samples: 6
Max nTPM: 71.4
Min nTPM: 28.4
P10809_1018
28.4
P10809_1037
31.3
P10809_1056
71.4
P10809_1075
41.4
P10809_1094
42.6
P10809_1106
67.3
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
81.8
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 60.5
Samples: 4
Max nTPM: 65.8
Min nTPM: 49.6
RHH5202_R3573
65.8
RHH5230_R3602
63.4
RHH5259_R3631
49.6
RHH5288_R3660
63.0
Effector memory CD8 T-cell nTPM: 67.7
Samples: 4
Max nTPM: 91.5
Min nTPM: 52.7
RHH5203_R3574
91.5
RHH5231_R3603
71.9
RHH5260_R3632
52.7
RHH5289_R3661
54.6
MAIT T-cell nTPM: 52.8
Samples: 4
Max nTPM: 58.8
Min nTPM: 49.6
RHH5233_R3605
50.9
RHH5205_R3576
58.8
RHH5262_R3634
49.6
RHH5297_R3663
52.0
Memory CD4 T-cell TFH nTPM: 68.2
Samples: 4
Max nTPM: 76.8
Min nTPM: 57.1
RHH5300_R3666
62.7
RHH5236_R3608
57.1
RHH5265_R3637
76.8
RHH5208_R3579
76.0
Memory CD4 T-cell Th1 nTPM: 64.0
Samples: 4
Max nTPM: 82.7
Min nTPM: 35.4
RHH5210_R3581
81.0
RHH5302_R3668
56.7
RHH5238_R3610
35.4
RHH5267_R3639
82.7
Memory CD4 T-cell Th1/Th17 nTPM: 77.6
Samples: 4
Max nTPM: 108.9
Min nTPM: 52.0
RHH5303_R3669
91.1
RHH5211_R3582
108.9
RHH5239_R3611
52.0
RHH5268_R3640
58.3
Memory CD4 T-cell Th17 nTPM: 66.7
Samples: 4
Max nTPM: 86.4
Min nTPM: 55.6
RHH5304_R3670
55.6
RHH5212_R3583
86.4
RHH5240_R3612
62.7
RHH5269_R3641
62.0
Memory CD4 T-cell Th2 nTPM: 66.5
Samples: 4
Max nTPM: 77.6
Min nTPM: 60.3
RHH5305_R3671
66.5
RHH5213_R3584
61.4
RHH5241_R3613
77.6
RHH5270_R3642
60.3
Naive CD4 T-cell nTPM: 71.7
Samples: 4
Max nTPM: 90.0
Min nTPM: 52.7
RHH5306_R3672
80.5
RHH5214_R3585
63.6
RHH5242_R3614
52.7
RHH5271_R3643
90.0
Naive CD8 T-cell nTPM: 57.4
Samples: 4
Max nTPM: 68.1
Min nTPM: 41.5
RHH5201_R3572
68.1
RHH5229_R3601
41.5
RHH5258_R3630
61.2
RHH5287_R3659
58.9
Non-Vd2 gdTCR nTPM: 67.6
Samples: 4
Max nTPM: 81.3
Min nTPM: 57.0
RHH5235_R3607
59.7
RHH5264_R3636
72.5
RHH5207_R3578
81.3
RHH5299_R3665
57.0
T-reg nTPM: 66.4
Samples: 4
Max nTPM: 77.3
Min nTPM: 49.7
RHH5301_R3667
67.8
RHH5237_R3609
77.3
RHH5266_R3638
49.7
RHH5209_R3580
70.8
Terminal effector memory CD4 T-cell nTPM: 81.8
Samples: 2
Max nTPM: 104.9
Min nTPM: 58.7
RHH5243_R3615
58.7
RHH5272_R3644
104.9
Terminal effector memory CD8 T-cell nTPM: 67.7
Samples: 4
Max nTPM: 77.4
Min nTPM: 54.3
RHH5232_R3604
72.6
RHH5204_R3575
77.4
RHH5261_R3633
54.3
RHH5296_R3662
66.6
Vd2 gdTCR nTPM: 48.8
Samples: 4
Max nTPM: 57.4
Min nTPM: 36.6
RHH5234_R3606
47.8
RHH5206_R3577
53.2
RHH5263_R3635
57.4
RHH5298_R3664
36.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
