We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
76.5
nTPM
Monaco:
306.8
nTPM
Schmiedel:
396.6
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
76.5
HPA sample
nTPM
gdT-cell nTPM: 6.3
Samples: 6
Max nTPM: 8.9
Min nTPM: 3.8
P10809_1007
4.9
P10809_1022
7.4
P10809_1041
8.9
P10809_1060
5.4
P10809_1077
3.8
P10809_1098
7.6
MAIT T-cell nTPM: 12.8
Samples: 6
Max nTPM: 17.6
Min nTPM: 5.3
P10809_1006
15.4
P10809_1024
5.3
P10809_1043
17.6
P10809_1062
15.7
P10809_1083
8.7
P10809_1097
13.9
Memory CD4 T-cell nTPM: 41.4
Samples: 6
Max nTPM: 61.4
Min nTPM: 20.5
P10809_1014
61.4
P10809_1026
47.1
P10809_1045
50.3
P10809_1064
24.0
P10809_1086
20.5
P10809_1113
45.1
Memory CD8 T-cell nTPM: 19.0
Samples: 5
Max nTPM: 35.7
Min nTPM: 4.0
P10809_1012
35.7
P10809_1027
4.0
P10809_1046
19.6
P10809_1065
6.9
P10809_1111
28.6
Naive CD4 T-cell nTPM: 76.5
Samples: 6
Max nTPM: 105.2
Min nTPM: 44.5
P10809_1015
104.2
P10809_1030
60.4
P10809_1049
58.4
P10809_1068
86.0
P10809_1085
44.5
P10809_1112
105.2
Naive CD8 T-cell nTPM: 45.4
Samples: 6
Max nTPM: 76.8
Min nTPM: 5.1
P10809_1016
76.8
P10809_1031
61.0
P10809_1050
39.2
P10809_1069
32.7
P10809_1087
5.1
P10809_1110
57.3
T-reg nTPM: 46.9
Samples: 6
Max nTPM: 64.6
Min nTPM: 36.4
P10809_1018
64.6
P10809_1037
36.9
P10809_1056
44.2
P10809_1075
45.8
P10809_1094
36.4
P10809_1106
53.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
306.8
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 94.0
Samples: 4
Max nTPM: 151.3
Min nTPM: 33.2
RHH5202_R3573
33.2
RHH5230_R3602
112.7
RHH5259_R3631
151.3
RHH5288_R3660
78.7
Effector memory CD8 T-cell nTPM: 37.5
Samples: 4
Max nTPM: 63.8
Min nTPM: 25.4
RHH5203_R3574
28.8
RHH5231_R3603
31.9
RHH5260_R3632
63.8
RHH5289_R3661
25.4
MAIT T-cell nTPM: 33.0
Samples: 4
Max nTPM: 49.3
Min nTPM: 16.1
RHH5233_R3605
16.1
RHH5205_R3576
40.2
RHH5262_R3634
49.3
RHH5297_R3663
26.4
Memory CD4 T-cell TFH nTPM: 150.8
Samples: 4
Max nTPM: 191.7
Min nTPM: 64.8
RHH5300_R3666
191.7
RHH5236_R3608
165.2
RHH5265_R3637
181.5
RHH5208_R3579
64.8
Memory CD4 T-cell Th1 nTPM: 180.3
Samples: 4
Max nTPM: 226.1
Min nTPM: 110.4
RHH5210_R3581
205.5
RHH5302_R3668
110.4
RHH5238_R3610
226.1
RHH5267_R3639
179.1
Memory CD4 T-cell Th1/Th17 nTPM: 102.4
Samples: 4
Max nTPM: 136.9
Min nTPM: 31.1
RHH5303_R3669
31.1
RHH5211_R3582
115.7
RHH5239_R3611
136.9
RHH5268_R3640
126.0
Memory CD4 T-cell Th17 nTPM: 151.1
Samples: 4
Max nTPM: 184.1
Min nTPM: 97.5
RHH5304_R3670
97.5
RHH5212_R3583
184.1
RHH5240_R3612
165.9
RHH5269_R3641
156.9
Memory CD4 T-cell Th2 nTPM: 145.8
Samples: 4
Max nTPM: 190.2
Min nTPM: 78.9
RHH5305_R3671
143.5
RHH5213_R3584
190.2
RHH5241_R3613
78.9
RHH5270_R3642
170.6
Naive CD4 T-cell nTPM: 306.8
Samples: 4
Max nTPM: 397.5
Min nTPM: 239.4
RHH5306_R3672
298.5
RHH5214_R3585
291.6
RHH5242_R3614
239.4
RHH5271_R3643
397.5
Naive CD8 T-cell nTPM: 198.6
Samples: 4
Max nTPM: 256.2
Min nTPM: 78.9
RHH5201_R3572
78.9
RHH5229_R3601
253.9
RHH5258_R3630
205.2
RHH5287_R3659
256.2
Non-Vd2 gdTCR nTPM: 33.1
Samples: 4
Max nTPM: 45.3
Min nTPM: 24.9
RHH5235_R3607
31.4
RHH5264_R3636
30.9
RHH5207_R3578
24.9
RHH5299_R3665
45.3
T-reg nTPM: 226.0
Samples: 4
Max nTPM: 286.4
Min nTPM: 174.9
RHH5301_R3667
184.5
RHH5237_R3609
174.9
RHH5266_R3638
258.0
RHH5209_R3580
286.4
Terminal effector memory CD4 T-cell nTPM: 49.8
Samples: 2
Max nTPM: 83.5
Min nTPM: 16.0
RHH5243_R3615
16.0
RHH5272_R3644
83.5
Terminal effector memory CD8 T-cell nTPM: 23.6
Samples: 4
Max nTPM: 35.1
Min nTPM: 15.7
RHH5232_R3604
15.7
RHH5204_R3575
27.3
RHH5261_R3633
35.1
RHH5296_R3662
16.4
Vd2 gdTCR nTPM: 32.1
Samples: 4
Max nTPM: 42.3
Min nTPM: 22.1
RHH5234_R3606
22.1
RHH5206_R3577
23.3
RHH5263_R3635
42.3
RHH5298_R3664
40.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
