HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
RNA expressioni
Consensus:12.0 nTPM
HPA Brain:67.6 nTPM
GTEx:12.0 nTPM
FANTOM5:53.9 Scaled Tags Per Million
Pig:9.9 nTPM
Mouse:2.1 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA017719
Glial cells Low
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 67.6
Sample id Sample description nTPM
Hippocampus
nTPM: 49.3
2529 Female, age 94, left hemisphere 64.1
1911 Female, age 85, right hemisphere 60.8
2621 Female, age 67, right hemisphere 46.8
2148 Female, age 91, left hemisphere 43.9
1855 Male, age 76, left hemisphere 41.0
1898 Male, age 80, left hemisphere 39.0
Dentate gyrus
nTPM: 51.9
2530 Female, age 94, left hemisphere 67.5
2010 Male, age 76, both hemispheres 54.9
2528 Male, age 74, both hemispheres 52.0
2246 Female, age 85, both hemispheres 51.8
2531 Female, age 67, both hemispheres 46.0
1927 Female, age 91, both hemispheres 39.4
Entorhinal gyrus
nTPM: 52.5
2117 Female, age 91, right hemisphere 80.3
2764 Male, age 80, right hemisphere 59.9
2613 Female, age 94, left hemisphere 48.1
1938 Female, age 85, left hemisphere 44.5
2686 Male, age 75, right hemisphere 42.5
1787 Male, age 76, left hemisphere 39.7
Hippocampus, CA1
nTPM: 42.9
2082 Female, age 91, right hemisphere 56.0
2527 Male, age 74, both hemispheres 47.8
1873 Female, age 85, both hemispheres 46.5
2749 Male, age 80, left hemisphere 33.8
2045 Male, age 76, both hemispheres 30.5
Hippocampus, CA2
nTPM: 55.3
1963 Male, age 80, left hemisphere 67.8
2113 Female, age 91, right hemisphere 64.0
2249 Male, age 74, both hemispheres 56.1
2437 Female, age 94, left hemisphere 55.6
1940 Female, age 85, left hemisphere 54.6
1892 Male, age 76, both hemispheres 33.8
Hippocampus, CA3
nTPM: 43.0
1891 Female, age 85, both hemispheres 73.7
2436 Male, age 74, both hemispheres 51.7
1867 Male, age 76, both hemispheres 40.8
2137 Male, age 80, left hemisphere 35.5
2620 Female, age 94, left hemisphere 29.8
2861 Female, age 67, both hemispheres 26.5
Parahippocampal cortex
nTPM: 47.3
2692 Male, age 74, both hemispheres 67.8
2532 Female, age 72, left hemisphere 59.4
1990 Female, age 91, right hemisphere 59.3
2245 Female, age 91, both hemispheres 48.9
1850 Male, age 80, both hemispheres 47.5
2693 Female, age 94, both hemispheres 43.9
2018 Male, age 76, both hemispheres 42.5
1933 Female, age 85, both hemispheres 41.6
2250 Female, age 67, right hemisphere 35.2
2622 Female, age 67, right hemisphere 27.3
Perirhinal gyrus
nTPM: 35.0
2521 Female, age 94, right hemisphere 43.7
2848 Male, age 76, right hemisphere 38.9
1794 Male, age 80, right hemisphere 32.5
1847 Female, age 91, left hemisphere 30.6
1841 Female, age 85, right hemisphere 29.4
Subiculum
nTPM: 67.6
2042 Male, age 76, both hemispheres 87.4
1901 Male, age 80, both hemispheres 79.5
2438 Female, age 94, left hemisphere 65.4
1977 Female, age 85, both hemispheres 63.5
2619 Male, age 74, both hemispheres 57.0
2729 Female, age 91, right hemisphere 52.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 12.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 12.0
Samples: 197

Max nTPM: 43.7
Min nTPM: 1.4
Std nTPM: 7.9
Median nTPM: 9.9
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 43.7
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 40.7
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 39.6
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 38.9
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 36.5
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 33.4
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 31.8
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 31.4
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 27.8
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 27.7
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 27.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 53.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 53.9
FF:10153-102I9 76 years, female 67.4
FF:10169-103B7 60 years, female 40.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 9.9
Pig sample Sample description nTPM
Subiculum
nTPM: 6.5
Samples: 4

Max nTPM: 7.3
Min nTPM: 6.0
Sample A Female 6.3
Sample B Female 7.3
Sample C Male 6.5
Sample D Male 6.0
Dorsal hippocampus
nTPM: 9.9
Samples: 4

Max nTPM: 13.1
Min nTPM: 4.5
Sample A Female 13.1
Sample B Female 9.0
Sample C Male 12.9
Sample D Male 4.5
Entorhinal cortex
nTPM: 5.6
Samples: 4

Max nTPM: 6.0
Min nTPM: 5.0
Sample A Female 5.4
Sample B Female 6.0
Sample C Male 5.0
Sample D Male 5.9
Ventral hippocampus
nTPM: 9.5
Samples: 4

Max nTPM: 10.9
Min nTPM: 6.8
Sample A Female 10.9
Sample B Female 6.8
Sample C Male 9.7
Sample D Male 10.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 2.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 1.5
Samples: 4

Max nTPM: 1.9
Min nTPM: 1.3
Sample A Male 1.9
Sample B Male 1.4
Sample C Female 1.5
Sample D Female 1.3
Hippocampal formation
nTPM: 2.2
Samples: 4

Max nTPM: 3.0
Min nTPM: 1.1
Sample A Male 1.1
Sample B Male 2.3
Sample C Female 3.0
Sample D Female 2.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
71147864 Antisense, RP_050719_02_E10, Mouse strain C57BL/6J (56 days, male) 0.0

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