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NSD3
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  • TISSUE

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  • NSD3
PROTEIN SUMMARY SECTION OVERVIEW GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

NSD3
Synonyms FLJ20353, KMT3F, WHISTLE, WHSC1L1
Gene descriptioni

Full gene name according to HGNC.

Nuclear receptor binding SET domain protein 3
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Cancer-related genes
Disease related genes
Enzymes
Metabolic proteins
Potential drug targets
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 8
Cytoband p11.23
Chromosome location (bp) 38269704 - 38382272
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

8
Ensembl ENSG00000147548 (version 109)
Entrez gene 54904
HGNC HGNC:12767
UniProt Q9BZ95 (UniProt - Evidence at protein level)
neXtProt NX_Q9BZ95
GeneCards NSD3
Antibodypedia NSD3 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Histone methyltransferase. Preferentially dimethylates 'Lys-4' and 'Lys-27' of histone H3 forming H3K2me2 and H3K27me2. H3 'Lys-4' methylation represents a specific tag for epigenetic transcriptional activation, while 'Lys-27' is a mark for transcriptional repression.... show less
Molecular function (UniProt)i

Keywords assigned by UniProt to proteins due to their particular molecular function.

Chromatin regulator, Methyltransferase, Transferase
Biological process (UniProt)i

Keywords assigned by UniProt to proteins because they are involved in a particular biological process.

Transcription, Transcription regulation
Ligand (UniProt)i

Keywords assigned by UniProt to proteins because they bind, are associated with, or whose activity is dependent of some molecule.

Metal-binding, S-adenosyl-L-methionine, Zinc
Gene summary (Entrez)i

Useful information about the gene from Entrez

This gene is related to the Wolf-Hirschhorn syndrome candidate-1 gene and encodes a protein with PWWP (proline-tryptophan-tryptophan-proline) domains. This protein methylates histone H3 at lysine residues 4 and 27, which represses gene transcription. Two alternatively spliced variants have been described. [provided by RefSeq, May 2015]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The ENSP identifier links to the Ensembl website protein summary, while the ENST identifier links to the Ensembl website transcript summary for the selected splice variant. The data in the UniProt column can be expanded to show links to all matching UniProt identifiers for this protein.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The Gene Ontology terms assigned to this protein are listed if expanding the Gene ontology column. The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide (according to a majority of the signal peptide predictors SPOCTOPUS, SignalP 4.0, and Phobius) and the number of predicted transmembrane region(s) (according to MDM) are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
NSD3-201
ENSP00000313410
ENST00000316985
Q9BZ95
[Direct mapping] Histone-lysine N-methyltransferase NSD3
Show all
Enzymes
   ENZYME proteins
   Transferases
Metabolic proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Cancer-related genes
   COSMIC somatic mutations in cancer genes
   COSMIC Amplifications
   COSMIC Somatic Mutations
   COSMIC Translocations
Disease related genes
Potential drug targets
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000785 [chromatin]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0005694 [chromosome]
GO:0006325 [chromatin organization]
GO:0006355 [regulation of DNA-templated transcription]
GO:0008168 [methyltransferase activity]
GO:0016570 [histone modification]
GO:0016740 [transferase activity]
GO:0018024 [histone-lysine N-methyltransferase activity]
GO:0032259 [methylation]
GO:0045893 [positive regulation of DNA-templated transcription]
GO:0046872 [metal ion binding]
GO:0046975 [histone H3K36 methyltransferase activity]
GO:0140537 [transcription regulator activator activity]
GO:0140946 []
GO:0140952 []
Show all
645 aa
72.6 kDa
No 0
NSD3-202
ENSP00000313983
ENST00000317025
Q9BZ95
[Direct mapping] Histone-lysine N-methyltransferase NSD3
Show all
Enzymes
   ENZYME proteins
   Transferases
Metabolic proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Cancer-related genes
   COSMIC somatic mutations in cancer genes
   COSMIC Amplifications
   COSMIC Somatic Mutations
   COSMIC Translocations
Disease related genes
Potential drug targets
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000785 [chromatin]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0005694 [chromosome]
GO:0006325 [chromatin organization]
GO:0006355 [regulation of DNA-templated transcription]
GO:0008168 [methyltransferase activity]
GO:0016570 [histone modification]
GO:0016740 [transferase activity]
GO:0018024 [histone-lysine N-methyltransferase activity]
GO:0032259 [methylation]
GO:0045893 [positive regulation of DNA-templated transcription]
GO:0046872 [metal ion binding]
GO:0046975 [histone H3K36 methyltransferase activity]
GO:0140537 [transcription regulator activator activity]
GO:0140946 []
GO:0140952 []
Show all
1437 aa
161.6 kDa
No 0
NSD3-203
ENSP00000393284
ENST00000433384
Q9BZ95
[Direct mapping] Histone-lysine N-methyltransferase NSD3
Show all
Enzymes
   ENZYME proteins
   Transferases
Metabolic proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Cancer-related genes
   COSMIC somatic mutations in cancer genes
   COSMIC Amplifications
   COSMIC Somatic Mutations
   COSMIC Translocations
Disease related genes
Potential drug targets
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000785 [chromatin]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0005694 [chromosome]
GO:0006325 [chromatin organization]
GO:0006355 [regulation of DNA-templated transcription]
GO:0008168 [methyltransferase activity]
GO:0016570 [histone modification]
GO:0016740 [transferase activity]
GO:0018024 [histone-lysine N-methyltransferase activity]
GO:0032259 [methylation]
GO:0045893 [positive regulation of DNA-templated transcription]
GO:0046872 [metal ion binding]
GO:0046975 [histone H3K36 methyltransferase activity]
GO:0140537 [transcription regulator activator activity]
GO:0140946 []
GO:0140952 []
Show all
1388 aa
156.1 kDa
No 0
NSD3-206
ENSP00000434730
ENST00000527502
Q9BZ95
[Direct mapping] Histone-lysine N-methyltransferase NSD3
Show all
Enzymes
   ENZYME proteins
   Transferases
Metabolic proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Cancer-related genes
   COSMIC somatic mutations in cancer genes
   COSMIC Amplifications
   COSMIC Somatic Mutations
   COSMIC Translocations
Disease related genes
Potential drug targets
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000785 [chromatin]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0005694 [chromosome]
GO:0006325 [chromatin organization]
GO:0006355 [regulation of DNA-templated transcription]
GO:0008168 [methyltransferase activity]
GO:0016570 [histone modification]
GO:0016740 [transferase activity]
GO:0018024 [histone-lysine N-methyltransferase activity]
GO:0032259 [methylation]
GO:0045893 [positive regulation of DNA-templated transcription]
GO:0046872 [metal ion binding]
GO:0046975 [histone H3K36 methyltransferase activity]
GO:0140537 [transcription regulator activator activity]
GO:0140946 []
GO:0140952 []
Show all
1426 aa
160.3 kDa
No 0
NSD3-208
ENSP00000435073
ENST00000528627
H0YE68
[Direct mapping] Histone-lysine N-methyltransferase NSD3
Show all
Metabolic proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Cancer-related genes
   COSMIC somatic mutations in cancer genes
   COSMIC Amplifications
   COSMIC Somatic Mutations
   COSMIC Translocations
Protein evidence (Ezkurdia et al 2014)
Show all
77 aa
8.6 kDa
No 0
NSD3-210
ENSP00000435422
ENST00000529223
E9PKA2
[Direct mapping] Histone-lysine N-methyltransferase NSD3
Show all
Metabolic proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Cancer-related genes
   COSMIC somatic mutations in cancer genes
   COSMIC Amplifications
   COSMIC Somatic Mutations
   COSMIC Translocations
Protein evidence (Ezkurdia et al 2014)
Show all
282 aa
31.6 kDa
No 0
NSD3-211
ENSP00000432544
ENST00000534155
E9PQ95
[Direct mapping] Histone-lysine N-methyltransferase NSD3
Show all
Metabolic proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Cancer-related genes
   COSMIC somatic mutations in cancer genes
   COSMIC Amplifications
   COSMIC Somatic Mutations
   COSMIC Translocations
Protein evidence (Ezkurdia et al 2014)
Show all
25 aa
2.8 kDa
No 0
NSD3-212
ENSP00000431598
ENST00000534539
E9PKL3
[Direct mapping] Histone-lysine N-methyltransferase NSD3
Show all
Metabolic proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Cancer-related genes
   COSMIC somatic mutations in cancer genes
   COSMIC Amplifications
   COSMIC Somatic Mutations
   COSMIC Translocations
Protein evidence (Ezkurdia et al 2014)
Show all
15 aa
1.7 kDa
No 0

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