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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
52.8
nTPM
Monaco:
101.6
nTPM
Schmiedel:
156.9
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
52.8
HPA sample
nTPM
gdT-cell nTPM: 35.9
Samples: 6
Max nTPM: 64.6
Min nTPM: 14.6
P10809_1007
64.6
P10809_1022
31.6
P10809_1041
37.7
P10809_1060
14.6
P10809_1077
34.1
P10809_1098
32.5
MAIT T-cell nTPM: 49.9
Samples: 6
Max nTPM: 78.2
Min nTPM: 20.9
P10809_1006
68.9
P10809_1024
20.9
P10809_1043
62.4
P10809_1062
26.8
P10809_1083
42.1
P10809_1097
78.2
Memory CD4 T-cell nTPM: 51.3
Samples: 6
Max nTPM: 75.2
Min nTPM: 15.3
P10809_1014
57.9
P10809_1026
70.7
P10809_1045
75.2
P10809_1064
60.6
P10809_1086
28.2
P10809_1113
15.3
Memory CD8 T-cell nTPM: 52.8
Samples: 5
Max nTPM: 80.1
Min nTPM: 32.3
P10809_1012
61.8
P10809_1027
32.3
P10809_1046
80.1
P10809_1065
45.8
P10809_1111
44.1
Naive CD4 T-cell nTPM: 52.1
Samples: 6
Max nTPM: 85.9
Min nTPM: 26.8
P10809_1015
52.0
P10809_1030
64.1
P10809_1049
85.9
P10809_1068
40.9
P10809_1085
43.1
P10809_1112
26.8
Naive CD8 T-cell nTPM: 45.9
Samples: 6
Max nTPM: 68.3
Min nTPM: 20.8
P10809_1016
35.3
P10809_1031
66.2
P10809_1050
68.3
P10809_1069
46.1
P10809_1087
20.8
P10809_1110
38.5
T-reg nTPM: 33.4
Samples: 6
Max nTPM: 60.5
Min nTPM: 16.0
P10809_1018
20.3
P10809_1037
42.8
P10809_1056
60.5
P10809_1075
35.4
P10809_1094
16.0
P10809_1106
25.6
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
101.6
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 78.1
Samples: 4
Max nTPM: 151.9
Min nTPM: 40.2
RHH5202_R3573
41.6
RHH5230_R3602
151.9
RHH5259_R3631
78.5
RHH5288_R3660
40.2
Effector memory CD8 T-cell nTPM: 98.8
Samples: 4
Max nTPM: 193.3
Min nTPM: 21.2
RHH5203_R3574
59.8
RHH5231_R3603
193.3
RHH5260_R3632
120.9
RHH5289_R3661
21.2
MAIT T-cell nTPM: 60.9
Samples: 4
Max nTPM: 93.5
Min nTPM: 44.3
RHH5233_R3605
55.4
RHH5205_R3576
44.3
RHH5262_R3634
93.5
RHH5297_R3663
50.3
Memory CD4 T-cell TFH nTPM: 84.3
Samples: 4
Max nTPM: 132.6
Min nTPM: 36.4
RHH5300_R3666
102.5
RHH5236_R3608
132.6
RHH5265_R3637
65.7
RHH5208_R3579
36.4
Memory CD4 T-cell Th1 nTPM: 67.2
Samples: 4
Max nTPM: 93.6
Min nTPM: 34.2
RHH5210_R3581
50.0
RHH5302_R3668
34.2
RHH5238_R3610
93.6
RHH5267_R3639
90.8
Memory CD4 T-cell Th1/Th17 nTPM: 85.5
Samples: 4
Max nTPM: 134.8
Min nTPM: 34.0
RHH5303_R3669
34.0
RHH5211_R3582
134.8
RHH5239_R3611
77.4
RHH5268_R3640
95.7
Memory CD4 T-cell Th17 nTPM: 80.2
Samples: 4
Max nTPM: 146.1
Min nTPM: 38.1
RHH5304_R3670
38.1
RHH5212_R3583
146.1
RHH5240_R3612
44.6
RHH5269_R3641
92.1
Memory CD4 T-cell Th2 nTPM: 97.3
Samples: 4
Max nTPM: 129.1
Min nTPM: 63.5
RHH5305_R3671
95.5
RHH5213_R3584
129.1
RHH5241_R3613
63.5
RHH5270_R3642
101.1
Naive CD4 T-cell nTPM: 94.9
Samples: 4
Max nTPM: 122.8
Min nTPM: 70.9
RHH5306_R3672
111.5
RHH5214_R3585
122.8
RHH5242_R3614
70.9
RHH5271_R3643
74.5
Naive CD8 T-cell nTPM: 70.4
Samples: 4
Max nTPM: 116.9
Min nTPM: 25.4
RHH5201_R3572
25.4
RHH5229_R3601
116.9
RHH5258_R3630
94.8
RHH5287_R3659
44.5
Non-Vd2 gdTCR nTPM: 80.0
Samples: 4
Max nTPM: 129.7
Min nTPM: 34.7
RHH5235_R3607
118.8
RHH5264_R3636
36.8
RHH5207_R3578
34.7
RHH5299_R3665
129.7
T-reg nTPM: 101.6
Samples: 4
Max nTPM: 137.7
Min nTPM: 78.1
RHH5301_R3667
90.3
RHH5237_R3609
137.7
RHH5266_R3638
78.1
RHH5209_R3580
100.2
Terminal effector memory CD4 T-cell nTPM: 81.4
Samples: 2
Max nTPM: 97.9
Min nTPM: 64.9
RHH5243_R3615
97.9
RHH5272_R3644
64.9
Terminal effector memory CD8 T-cell nTPM: 78.7
Samples: 4
Max nTPM: 155.6
Min nTPM: 36.6
RHH5232_R3604
63.8
RHH5204_R3575
58.6
RHH5261_R3633
155.6
RHH5296_R3662
36.6
Vd2 gdTCR nTPM: 83.9
Samples: 4
Max nTPM: 101.9
Min nTPM: 66.3
RHH5234_R3606
94.0
RHH5206_R3577
66.3
RHH5263_R3635
73.3
RHH5298_R3664
101.9
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
