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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
70.5
nTPM
Monaco:
172.8
nTPM
Schmiedel:
180.0
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
70.5
HPA sample
nTPM
gdT-cell nTPM: 48.0
Samples: 6
Max nTPM: 64.5
Min nTPM: 35.3
P10809_1007
37.0
P10809_1022
35.3
P10809_1041
38.8
P10809_1060
55.1
P10809_1077
64.5
P10809_1098
57.1
MAIT T-cell nTPM: 58.4
Samples: 6
Max nTPM: 78.2
Min nTPM: 34.5
P10809_1006
34.5
P10809_1024
62.1
P10809_1043
50.3
P10809_1062
52.0
P10809_1083
73.1
P10809_1097
78.2
Memory CD4 T-cell nTPM: 61.7
Samples: 6
Max nTPM: 82.7
Min nTPM: 47.1
P10809_1014
47.1
P10809_1026
55.7
P10809_1045
48.6
P10809_1064
79.0
P10809_1086
82.7
P10809_1113
57.3
Memory CD8 T-cell nTPM: 60.5
Samples: 5
Max nTPM: 74.5
Min nTPM: 34.0
P10809_1012
34.0
P10809_1027
68.6
P10809_1046
51.0
P10809_1065
74.5
P10809_1111
74.5
Naive CD4 T-cell nTPM: 54.2
Samples: 6
Max nTPM: 59.0
Min nTPM: 42.9
P10809_1015
42.9
P10809_1030
57.6
P10809_1049
54.7
P10809_1068
59.0
P10809_1085
58.7
P10809_1112
52.4
Naive CD8 T-cell nTPM: 58.0
Samples: 6
Max nTPM: 88.9
Min nTPM: 36.9
P10809_1016
36.9
P10809_1031
45.6
P10809_1050
54.4
P10809_1069
66.5
P10809_1087
88.9
P10809_1110
55.9
T-reg nTPM: 70.5
Samples: 6
Max nTPM: 86.9
Min nTPM: 48.4
P10809_1018
48.4
P10809_1037
86.9
P10809_1056
83.1
P10809_1075
60.7
P10809_1094
75.8
P10809_1106
68.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
172.8
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 109.8
Samples: 4
Max nTPM: 151.0
Min nTPM: 53.0
RHH5202_R3573
151.0
RHH5230_R3602
99.4
RHH5259_R3631
53.0
RHH5288_R3660
135.8
Effector memory CD8 T-cell nTPM: 104.8
Samples: 4
Max nTPM: 126.9
Min nTPM: 50.9
RHH5203_R3574
126.9
RHH5231_R3603
122.9
RHH5260_R3632
50.9
RHH5289_R3661
118.4
MAIT T-cell nTPM: 136.5
Samples: 4
Max nTPM: 164.7
Min nTPM: 108.5
RHH5233_R3605
164.7
RHH5205_R3576
108.5
RHH5262_R3634
109.6
RHH5297_R3663
163.1
Memory CD4 T-cell TFH nTPM: 105.4
Samples: 4
Max nTPM: 134.9
Min nTPM: 64.5
RHH5300_R3666
134.9
RHH5236_R3608
101.5
RHH5265_R3637
64.5
RHH5208_R3579
120.7
Memory CD4 T-cell Th1 nTPM: 107.0
Samples: 4
Max nTPM: 178.7
Min nTPM: 51.3
RHH5210_R3581
115.9
RHH5302_R3668
178.7
RHH5238_R3610
82.0
RHH5267_R3639
51.3
Memory CD4 T-cell Th1/Th17 nTPM: 112.4
Samples: 4
Max nTPM: 147.1
Min nTPM: 63.6
RHH5303_R3669
147.1
RHH5211_R3582
133.3
RHH5239_R3611
105.4
RHH5268_R3640
63.6
Memory CD4 T-cell Th17 nTPM: 93.3
Samples: 4
Max nTPM: 109.6
Min nTPM: 81.2
RHH5304_R3670
95.6
RHH5212_R3583
86.9
RHH5240_R3612
109.6
RHH5269_R3641
81.2
Memory CD4 T-cell Th2 nTPM: 115.2
Samples: 4
Max nTPM: 150.5
Min nTPM: 67.3
RHH5305_R3671
150.5
RHH5213_R3584
124.3
RHH5241_R3613
118.7
RHH5270_R3642
67.3
Naive CD4 T-cell nTPM: 89.1
Samples: 4
Max nTPM: 120.9
Min nTPM: 59.3
RHH5306_R3672
92.2
RHH5214_R3585
120.9
RHH5242_R3614
84.0
RHH5271_R3643
59.3
Naive CD8 T-cell nTPM: 82.7
Samples: 4
Max nTPM: 97.8
Min nTPM: 62.8
RHH5201_R3572
97.8
RHH5229_R3601
80.2
RHH5258_R3630
62.8
RHH5287_R3659
89.9
Non-Vd2 gdTCR nTPM: 139.9
Samples: 4
Max nTPM: 192.8
Min nTPM: 75.8
RHH5235_R3607
75.8
RHH5264_R3636
123.3
RHH5207_R3578
167.8
RHH5299_R3665
192.8
T-reg nTPM: 93.6
Samples: 4
Max nTPM: 137.5
Min nTPM: 64.6
RHH5301_R3667
137.5
RHH5237_R3609
76.9
RHH5266_R3638
64.6
RHH5209_R3580
95.4
Terminal effector memory CD4 T-cell nTPM: 130.1
Samples: 2
Max nTPM: 153.4
Min nTPM: 106.8
RHH5243_R3615
106.8
RHH5272_R3644
153.4
Terminal effector memory CD8 T-cell nTPM: 172.8
Samples: 4
Max nTPM: 231.6
Min nTPM: 110.7
RHH5232_R3604
163.3
RHH5204_R3575
231.6
RHH5261_R3633
110.7
RHH5296_R3662
185.5
Vd2 gdTCR nTPM: 162.5
Samples: 4
Max nTPM: 234.9
Min nTPM: 95.2
RHH5234_R3606
127.7
RHH5206_R3577
234.9
RHH5263_R3635
95.2
RHH5298_R3664
192.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
