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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
80.9
nTPM
Monaco:
141.5
nTPM
Schmiedel:
50.7
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
80.9
HPA sample
nTPM
gdT-cell nTPM: 80.9
Samples: 6
Max nTPM: 147.9
Min nTPM: 49.5
P10809_1007
49.5
P10809_1022
147.9
P10809_1041
94.6
P10809_1060
57.2
P10809_1077
71.1
P10809_1098
64.8
MAIT T-cell nTPM: 70.0
Samples: 6
Max nTPM: 105.4
Min nTPM: 47.3
P10809_1006
51.0
P10809_1024
105.4
P10809_1043
64.8
P10809_1062
47.3
P10809_1083
66.4
P10809_1097
84.8
Memory CD4 T-cell nTPM: 70.0
Samples: 6
Max nTPM: 94.8
Min nTPM: 52.4
P10809_1014
54.9
P10809_1026
94.8
P10809_1045
84.7
P10809_1064
52.4
P10809_1086
80.0
P10809_1113
53.1
Memory CD8 T-cell nTPM: 57.9
Samples: 5
Max nTPM: 84.3
Min nTPM: 46.0
P10809_1012
46.0
P10809_1027
84.3
P10809_1046
58.0
P10809_1065
54.1
P10809_1111
47.0
Naive CD4 T-cell nTPM: 67.5
Samples: 6
Max nTPM: 89.9
Min nTPM: 44.8
P10809_1015
44.8
P10809_1030
89.6
P10809_1049
89.9
P10809_1068
51.4
P10809_1085
74.9
P10809_1112
54.1
Naive CD8 T-cell nTPM: 57.8
Samples: 6
Max nTPM: 91.4
Min nTPM: 43.4
P10809_1016
47.5
P10809_1031
91.4
P10809_1050
48.9
P10809_1069
55.4
P10809_1087
60.1
P10809_1110
43.4
T-reg nTPM: 74.9
Samples: 6
Max nTPM: 110.9
Min nTPM: 55.6
P10809_1018
57.8
P10809_1037
98.6
P10809_1056
110.9
P10809_1075
59.2
P10809_1094
67.4
P10809_1106
55.6
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
141.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 73.1
Samples: 4
Max nTPM: 100.2
Min nTPM: 55.9
RHH5202_R3573
62.8
RHH5230_R3602
100.2
RHH5259_R3631
55.9
RHH5288_R3660
73.5
Effector memory CD8 T-cell nTPM: 111.5
Samples: 4
Max nTPM: 141.3
Min nTPM: 77.2
RHH5203_R3574
141.3
RHH5231_R3603
140.0
RHH5260_R3632
77.2
RHH5289_R3661
87.3
MAIT T-cell nTPM: 119.2
Samples: 4
Max nTPM: 140.6
Min nTPM: 90.7
RHH5233_R3605
127.5
RHH5205_R3576
140.6
RHH5262_R3634
118.1
RHH5297_R3663
90.7
Memory CD4 T-cell TFH nTPM: 108.0
Samples: 4
Max nTPM: 141.6
Min nTPM: 84.2
RHH5300_R3666
102.7
RHH5236_R3608
141.6
RHH5265_R3637
84.2
RHH5208_R3579
103.5
Memory CD4 T-cell Th1 nTPM: 119.2
Samples: 4
Max nTPM: 142.4
Min nTPM: 101.1
RHH5210_R3581
124.6
RHH5302_R3668
142.4
RHH5238_R3610
108.5
RHH5267_R3639
101.1
Memory CD4 T-cell Th1/Th17 nTPM: 134.0
Samples: 4
Max nTPM: 174.8
Min nTPM: 96.8
RHH5303_R3669
156.4
RHH5211_R3582
174.8
RHH5239_R3611
96.8
RHH5268_R3640
108.0
Memory CD4 T-cell Th17 nTPM: 131.7
Samples: 4
Max nTPM: 153.2
Min nTPM: 99.4
RHH5304_R3670
131.1
RHH5212_R3583
153.2
RHH5240_R3612
143.1
RHH5269_R3641
99.4
Memory CD4 T-cell Th2 nTPM: 120.2
Samples: 4
Max nTPM: 152.2
Min nTPM: 96.4
RHH5305_R3671
119.6
RHH5213_R3584
152.2
RHH5241_R3613
112.7
RHH5270_R3642
96.4
Naive CD4 T-cell nTPM: 107.9
Samples: 4
Max nTPM: 139.2
Min nTPM: 86.9
RHH5306_R3672
94.4
RHH5214_R3585
139.2
RHH5242_R3614
86.9
RHH5271_R3643
110.9
Naive CD8 T-cell nTPM: 91.7
Samples: 4
Max nTPM: 126.1
Min nTPM: 57.5
RHH5201_R3572
126.1
RHH5229_R3601
71.1
RHH5258_R3630
57.5
RHH5287_R3659
112.0
Non-Vd2 gdTCR nTPM: 113.7
Samples: 4
Max nTPM: 138.5
Min nTPM: 91.6
RHH5235_R3607
108.8
RHH5264_R3636
116.0
RHH5207_R3578
138.5
RHH5299_R3665
91.6
T-reg nTPM: 102.2
Samples: 4
Max nTPM: 122.7
Min nTPM: 78.6
RHH5301_R3667
108.5
RHH5237_R3609
98.8
RHH5266_R3638
78.6
RHH5209_R3580
122.7
Terminal effector memory CD4 T-cell nTPM: 141.5
Samples: 2
Max nTPM: 178.3
Min nTPM: 104.6
RHH5243_R3615
178.3
RHH5272_R3644
104.6
Terminal effector memory CD8 T-cell nTPM: 87.2
Samples: 4
Max nTPM: 101.4
Min nTPM: 73.0
RHH5232_R3604
89.8
RHH5204_R3575
101.4
RHH5261_R3633
84.4
RHH5296_R3662
73.0
Vd2 gdTCR nTPM: 115.8
Samples: 4
Max nTPM: 128.4
Min nTPM: 109.6
RHH5234_R3606
128.4
RHH5206_R3577
111.4
RHH5263_R3635
109.6
RHH5298_R3664
113.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
