HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:12.9 nTPM
HPA Brain:13.5 nTPM
GTEx:12.9 nTPM
FANTOM5:9.9 Scaled Tags Per Million
Pig:6.8 nTPM
Mouse:8.1 nTPM
Allen mouse:0.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA016607Antibody CAB037331
Glial cells Not detectedNot detected
Neuronal cells Not detectedNot detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 13.5
Sample id Sample description nTPM
Hippocampus
nTPM: 10.5
2529 Female, age 94, left hemisphere 12.8
2621 Female, age 67, right hemisphere 11.1
1911 Female, age 85, right hemisphere 10.6
1855 Male, age 76, left hemisphere 9.5
1898 Male, age 80, left hemisphere 9.5
2148 Female, age 91, left hemisphere 9.5
Dentate gyrus
nTPM: 10.5
2010 Male, age 76, both hemispheres 19.5
2528 Male, age 74, both hemispheres 10.0
2530 Female, age 94, left hemisphere 9.8
2246 Female, age 85, both hemispheres 8.1
2531 Female, age 67, both hemispheres 8.0
1927 Female, age 91, both hemispheres 7.4
Entorhinal gyrus
nTPM: 9.1
2117 Female, age 91, right hemisphere 14.7
1787 Male, age 76, left hemisphere 12.7
2686 Male, age 75, right hemisphere 8.0
1938 Female, age 85, left hemisphere 7.8
2764 Male, age 80, right hemisphere 6.0
2613 Female, age 94, left hemisphere 5.3
Hippocampus, CA1
nTPM: 10.7
2045 Male, age 76, both hemispheres 18.4
2527 Male, age 74, both hemispheres 10.8
2082 Female, age 91, right hemisphere 9.3
1873 Female, age 85, both hemispheres 8.7
2749 Male, age 80, left hemisphere 6.4
Hippocampus, CA2
nTPM: 10.3
2437 Female, age 94, left hemisphere 11.1
1892 Male, age 76, both hemispheres 10.9
2249 Male, age 74, both hemispheres 10.9
2113 Female, age 91, right hemisphere 10.5
1940 Female, age 85, left hemisphere 9.8
1963 Male, age 80, left hemisphere 8.4
Hippocampus, CA3
nTPM: 12.4
1867 Male, age 76, both hemispheres 26.9
1891 Female, age 85, both hemispheres 10.8
2436 Male, age 74, both hemispheres 10.2
2861 Female, age 67, both hemispheres 9.6
2620 Female, age 94, left hemisphere 9.1
2137 Male, age 80, left hemisphere 8.0
Parahippocampal cortex
nTPM: 13.1
2018 Male, age 76, both hemispheres 55.3
2692 Male, age 74, both hemispheres 10.0
2532 Female, age 72, left hemisphere 9.2
1990 Female, age 91, right hemisphere 9.0
1933 Female, age 85, both hemispheres 8.7
2622 Female, age 67, right hemisphere 8.2
2245 Female, age 91, both hemispheres 8.1
2250 Female, age 67, right hemisphere 7.8
1850 Male, age 80, both hemispheres 7.3
2693 Female, age 94, both hemispheres 7.0
Perirhinal gyrus
nTPM: 8.0
2848 Male, age 76, right hemisphere 9.2
1847 Female, age 91, left hemisphere 8.1
2521 Female, age 94, right hemisphere 7.9
1841 Female, age 85, right hemisphere 7.6
1794 Male, age 80, right hemisphere 7.4
Subiculum
nTPM: 13.5
2042 Male, age 76, both hemispheres 30.5
2729 Female, age 91, right hemisphere 12.0
2619 Male, age 74, both hemispheres 11.9
2438 Female, age 94, left hemisphere 9.8
1901 Male, age 80, both hemispheres 9.0
1977 Female, age 85, both hemispheres 7.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 12.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 12.9
Samples: 197

Max nTPM: 126.9
Min nTPM: 3.3
Std nTPM: 14.5
Median nTPM: 9.1
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 126.9
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 117.8
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 96.5
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 46.7
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 41.7
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 38.0
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 37.1
GTEX-16XZZ-0011-R1a-SM-7LTAH 60-69 years, male 36.0
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 34.0
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 33.0
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 32.7
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 9.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 9.9
FF:10169-103B7 60 years, female 10.3
FF:10153-102I9 76 years, female 9.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 6.8
Pig sample Sample description nTPM
Subiculum
nTPM: 6.8
Samples: 4

Max nTPM: 8.5
Min nTPM: 5.7
Sample A Female 5.7
Sample B Female 6.8
Sample C Male 6.3
Sample D Male 8.5
Dorsal hippocampus
nTPM: 6.3
Samples: 4

Max nTPM: 6.4
Min nTPM: 6.1
Sample A Female 6.4
Sample B Female 6.2
Sample C Male 6.1
Sample D Male 6.3
Entorhinal cortex
nTPM: 6.5
Samples: 4

Max nTPM: 6.8
Min nTPM: 6.0
Sample A Female 6.0
Sample B Female 6.6
Sample C Male 6.8
Sample D Male 6.4
Ventral hippocampus
nTPM: 6.3
Samples: 4

Max nTPM: 6.7
Min nTPM: 5.5
Sample A Female 5.5
Sample B Female 6.7
Sample C Male 6.4
Sample D Male 6.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 8.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 8.1
Samples: 4

Max nTPM: 9.4
Min nTPM: 7.1
Sample A Male 9.4
Sample B Male 7.7
Sample C Female 7.1
Sample D Female 8.1
Hippocampal formation
nTPM: 7.8
Samples: 4

Max nTPM: 9.4
Min nTPM: 6.2
Sample A Male 9.4
Sample B Male 6.2
Sample C Female 6.3
Sample D Female 9.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.5
75988239 Antisense, RP_060606_02_D11, Mouse strain C57BL/6J (56 days, male) 0.5

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org