HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:19.5 nTPM
HPA Brain:12.7 nTPM
GTEx:19.5 nTPM
FANTOM5:4.9 Scaled Tags Per Million
Pig:4.4 nTPM
Mouse:20.0 nTPM
Allen mouse:2.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA020378
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 12.7
Sample id Sample description nTPM
Hippocampus
nTPM: 12.0
1898 Male, age 80, left hemisphere 13.5
2529 Female, age 94, left hemisphere 13.5
1911 Female, age 85, right hemisphere 13.0
1855 Male, age 76, left hemisphere 11.4
2621 Female, age 67, right hemisphere 11.0
2148 Female, age 91, left hemisphere 9.8
Dentate gyrus
nTPM: 10.9
2528 Male, age 74, both hemispheres 12.4
2246 Female, age 85, both hemispheres 11.6
2530 Female, age 94, left hemisphere 11.1
2010 Male, age 76, both hemispheres 10.4
2531 Female, age 67, both hemispheres 10.4
1927 Female, age 91, both hemispheres 9.6
Entorhinal gyrus
nTPM: 10.8
1787 Male, age 76, left hemisphere 13.1
2117 Female, age 91, right hemisphere 11.3
1938 Female, age 85, left hemisphere 11.1
2686 Male, age 75, right hemisphere 11.0
2613 Female, age 94, left hemisphere 10.0
2764 Male, age 80, right hemisphere 8.2
Hippocampus, CA1
nTPM: 11.2
2082 Female, age 91, right hemisphere 13.2
1873 Female, age 85, both hemispheres 12.2
2527 Male, age 74, both hemispheres 12.0
2045 Male, age 76, both hemispheres 10.9
2749 Male, age 80, left hemisphere 7.9
Hippocampus, CA2
nTPM: 12.7
2249 Male, age 74, both hemispheres 14.6
2113 Female, age 91, right hemisphere 12.8
2437 Female, age 94, left hemisphere 12.5
1963 Male, age 80, left hemisphere 12.3
1940 Female, age 85, left hemisphere 12.2
1892 Male, age 76, both hemispheres 11.5
Hippocampus, CA3
nTPM: 11.0
1891 Female, age 85, both hemispheres 12.8
2620 Female, age 94, left hemisphere 11.8
2137 Male, age 80, left hemisphere 11.6
1867 Male, age 76, both hemispheres 11.5
2436 Male, age 74, both hemispheres 10.9
2861 Female, age 67, both hemispheres 7.3
Parahippocampal cortex
nTPM: 11.5
2692 Male, age 74, both hemispheres 14.9
1850 Male, age 80, both hemispheres 12.1
2018 Male, age 76, both hemispheres 12.0
2622 Female, age 67, right hemisphere 11.9
1990 Female, age 91, right hemisphere 11.5
2532 Female, age 72, left hemisphere 11.4
1933 Female, age 85, both hemispheres 11.2
2245 Female, age 91, both hemispheres 10.5
2693 Female, age 94, both hemispheres 10.4
2250 Female, age 67, right hemisphere 9.0
Perirhinal gyrus
nTPM: 11.9
2848 Male, age 76, right hemisphere 14.1
1841 Female, age 85, right hemisphere 13.0
1794 Male, age 80, right hemisphere 11.2
1847 Female, age 91, left hemisphere 10.6
2521 Female, age 94, right hemisphere 10.6
Subiculum
nTPM: 11.9
2438 Female, age 94, left hemisphere 15.2
1977 Female, age 85, both hemispheres 11.9
2042 Male, age 76, both hemispheres 11.7
1901 Male, age 80, both hemispheres 10.9
2619 Male, age 74, both hemispheres 10.8
2729 Female, age 91, right hemisphere 10.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 19.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 19.5
Samples: 197

Max nTPM: 51.3
Min nTPM: 6.2
Std nTPM: 6.0
Median nTPM: 18.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 51.3
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 35.8
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 35.2
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 35.0
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 34.8
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 33.4
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 32.9
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 32.1
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 32.0
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 31.9
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 31.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 4.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 4.9
FF:10153-102I9 76 years, female 7.8
FF:10169-103B7 60 years, female 2.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 4.4
Pig sample Sample description nTPM
Subiculum
nTPM: 3.7
Samples: 4

Max nTPM: 4.7
Min nTPM: 3.1
Sample A Female 4.7
Sample B Female 3.2
Sample C Male 3.1
Sample D Male 3.7
Dorsal hippocampus
nTPM: 3.8
Samples: 4

Max nTPM: 5.1
Min nTPM: 2.8
Sample A Female 5.1
Sample B Female 4.1
Sample C Male 2.8
Sample D Male 3.2
Entorhinal cortex
nTPM: 4.1
Samples: 4

Max nTPM: 4.7
Min nTPM: 3.5
Sample A Female 3.9
Sample B Female 4.7
Sample C Male 4.3
Sample D Male 3.5
Ventral hippocampus
nTPM: 4.4
Samples: 4

Max nTPM: 5.0
Min nTPM: 3.9
Sample A Female 5.0
Sample B Female 4.1
Sample C Male 4.5
Sample D Male 3.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 20.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 16.9
Samples: 4

Max nTPM: 17.7
Min nTPM: 16.1
Sample A Male 17.7
Sample B Male 17.2
Sample C Female 16.1
Sample D Female 16.6
Hippocampal formation
nTPM: 20.0
Samples: 4

Max nTPM: 24.6
Min nTPM: 17.4
Sample A Male 24.6
Sample B Male 17.4
Sample C Female 18.0
Sample D Female 20.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.6
68666517 Antisense, RP_050126_02_D10, Mouse strain C57BL/6J (56 days, male) 2.6

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