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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
169.3
nTPM
Monaco:
540.3
nTPM
Schmiedel:
245.4
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
169.3
HPA sample
nTPM
gdT-cell nTPM: 169.3
Samples: 6
Max nTPM: 188.7
Min nTPM: 144.1
P10809_1007
161.2
P10809_1022
188.7
P10809_1041
171.4
P10809_1060
144.1
P10809_1077
187.6
P10809_1098
162.9
MAIT T-cell nTPM: 166.1
Samples: 6
Max nTPM: 206.6
Min nTPM: 140.3
P10809_1006
206.6
P10809_1024
196.5
P10809_1043
150.0
P10809_1062
159.2
P10809_1083
143.8
P10809_1097
140.3
Memory CD4 T-cell nTPM: 84.5
Samples: 6
Max nTPM: 131.3
Min nTPM: 55.5
P10809_1014
79.3
P10809_1026
55.5
P10809_1045
82.2
P10809_1064
92.3
P10809_1086
131.3
P10809_1113
66.3
Memory CD8 T-cell nTPM: 153.4
Samples: 5
Max nTPM: 178.6
Min nTPM: 132.3
P10809_1012
178.6
P10809_1027
164.6
P10809_1046
151.5
P10809_1065
140.0
P10809_1111
132.3
Naive CD4 T-cell nTPM: 15.1
Samples: 6
Max nTPM: 42.6
Min nTPM: 8.2
P10809_1015
12.9
P10809_1030
8.2
P10809_1049
8.2
P10809_1068
10.1
P10809_1085
42.6
P10809_1112
8.5
Naive CD8 T-cell nTPM: 81.4
Samples: 6
Max nTPM: 188.3
Min nTPM: 32.5
P10809_1016
32.5
P10809_1031
60.1
P10809_1050
78.7
P10809_1069
93.8
P10809_1087
188.3
P10809_1110
35.1
T-reg nTPM: 8.8
Samples: 6
Max nTPM: 13.4
Min nTPM: 4.3
P10809_1018
13.4
P10809_1037
8.1
P10809_1056
6.4
P10809_1075
4.3
P10809_1094
9.7
P10809_1106
10.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
540.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 330.1
Samples: 4
Max nTPM: 391.6
Min nTPM: 277.0
RHH5202_R3573
391.6
RHH5230_R3602
354.0
RHH5259_R3631
297.8
RHH5288_R3660
277.0
Effector memory CD8 T-cell nTPM: 452.5
Samples: 4
Max nTPM: 502.2
Min nTPM: 404.1
RHH5203_R3574
502.2
RHH5231_R3603
404.1
RHH5260_R3632
417.0
RHH5289_R3661
486.6
MAIT T-cell nTPM: 540.3
Samples: 4
Max nTPM: 678.0
Min nTPM: 413.9
RHH5233_R3605
619.8
RHH5205_R3576
678.0
RHH5262_R3634
449.6
RHH5297_R3663
413.9
Memory CD4 T-cell TFH nTPM: 154.0
Samples: 4
Max nTPM: 219.3
Min nTPM: 103.5
RHH5300_R3666
144.9
RHH5236_R3608
103.5
RHH5265_R3637
148.3
RHH5208_R3579
219.3
Memory CD4 T-cell Th1 nTPM: 246.3
Samples: 4
Max nTPM: 315.6
Min nTPM: 183.5
RHH5210_R3581
183.5
RHH5302_R3668
224.2
RHH5238_R3610
315.6
RHH5267_R3639
261.7
Memory CD4 T-cell Th1/Th17 nTPM: 392.7
Samples: 4
Max nTPM: 425.4
Min nTPM: 353.5
RHH5303_R3669
406.4
RHH5211_R3582
385.3
RHH5239_R3611
425.4
RHH5268_R3640
353.5
Memory CD4 T-cell Th17 nTPM: 194.1
Samples: 4
Max nTPM: 267.5
Min nTPM: 156.1
RHH5304_R3670
267.5
RHH5212_R3583
175.2
RHH5240_R3612
156.1
RHH5269_R3641
177.6
Memory CD4 T-cell Th2 nTPM: 56.6
Samples: 4
Max nTPM: 73.2
Min nTPM: 30.2
RHH5305_R3671
56.6
RHH5213_R3584
73.2
RHH5241_R3613
30.2
RHH5270_R3642
66.4
Naive CD4 T-cell nTPM: 27.1
Samples: 4
Max nTPM: 31.8
Min nTPM: 20.2
RHH5306_R3672
30.3
RHH5214_R3585
31.8
RHH5242_R3614
20.2
RHH5271_R3643
25.9
Naive CD8 T-cell nTPM: 37.3
Samples: 4
Max nTPM: 59.8
Min nTPM: 21.8
RHH5201_R3572
59.8
RHH5229_R3601
40.3
RHH5258_R3630
27.4
RHH5287_R3659
21.8
Non-Vd2 gdTCR nTPM: 528.9
Samples: 4
Max nTPM: 618.8
Min nTPM: 466.6
RHH5235_R3607
534.4
RHH5264_R3636
495.7
RHH5207_R3578
618.8
RHH5299_R3665
466.6
T-reg nTPM: 44.3
Samples: 4
Max nTPM: 59.8
Min nTPM: 34.8
RHH5301_R3667
34.8
RHH5237_R3609
46.5
RHH5266_R3638
36.2
RHH5209_R3580
59.8
Terminal effector memory CD4 T-cell nTPM: 477.7
Samples: 2
Max nTPM: 537.1
Min nTPM: 418.2
RHH5243_R3615
537.1
RHH5272_R3644
418.2
Terminal effector memory CD8 T-cell nTPM: 522.9
Samples: 4
Max nTPM: 569.2
Min nTPM: 492.2
RHH5232_R3604
519.3
RHH5204_R3575
492.2
RHH5261_R3633
569.2
RHH5296_R3662
511.0
Vd2 gdTCR nTPM: 502.2
Samples: 4
Max nTPM: 545.3
Min nTPM: 404.1
RHH5234_R3606
545.3
RHH5206_R3577
531.7
RHH5263_R3635
527.5
RHH5298_R3664
404.1
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
