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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
104.3
nTPM
Monaco:
165.9
nTPM
Schmiedel:
246.3
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
104.3
HPA sample
nTPM
gdT-cell nTPM: 83.9
Samples: 6
Max nTPM: 105.8
Min nTPM: 68.3
P10809_1007
68.3
P10809_1022
105.8
P10809_1041
105.5
P10809_1060
69.5
P10809_1077
74.9
P10809_1098
79.5
MAIT T-cell nTPM: 104.3
Samples: 6
Max nTPM: 134.9
Min nTPM: 79.5
P10809_1006
83.4
P10809_1024
134.9
P10809_1043
104.0
P10809_1062
108.3
P10809_1083
79.5
P10809_1097
115.8
Memory CD4 T-cell nTPM: 79.1
Samples: 6
Max nTPM: 92.0
Min nTPM: 71.3
P10809_1014
79.2
P10809_1026
79.9
P10809_1045
92.0
P10809_1064
75.3
P10809_1086
71.3
P10809_1113
77.1
Memory CD8 T-cell nTPM: 79.7
Samples: 5
Max nTPM: 89.5
Min nTPM: 74.5
P10809_1012
74.5
P10809_1027
89.5
P10809_1046
83.4
P10809_1065
76.1
P10809_1111
75.2
Naive CD4 T-cell nTPM: 85.1
Samples: 6
Max nTPM: 108.3
Min nTPM: 66.5
P10809_1015
69.6
P10809_1030
103.2
P10809_1049
108.3
P10809_1068
85.9
P10809_1085
66.5
P10809_1112
76.8
Naive CD8 T-cell nTPM: 79.5
Samples: 6
Max nTPM: 98.3
Min nTPM: 70.2
P10809_1016
70.2
P10809_1031
83.7
P10809_1050
98.3
P10809_1069
75.7
P10809_1087
71.0
P10809_1110
77.9
T-reg nTPM: 102.3
Samples: 6
Max nTPM: 145.5
Min nTPM: 82.3
P10809_1018
82.3
P10809_1037
112.6
P10809_1056
145.5
P10809_1075
92.4
P10809_1094
92.0
P10809_1106
88.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
165.9
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 129.9
Samples: 4
Max nTPM: 151.9
Min nTPM: 107.9
RHH5202_R3573
151.9
RHH5230_R3602
139.5
RHH5259_R3631
107.9
RHH5288_R3660
120.1
Effector memory CD8 T-cell nTPM: 162.1
Samples: 4
Max nTPM: 178.9
Min nTPM: 138.9
RHH5203_R3574
170.0
RHH5231_R3603
160.4
RHH5260_R3632
138.9
RHH5289_R3661
178.9
MAIT T-cell nTPM: 165.9
Samples: 4
Max nTPM: 221.3
Min nTPM: 138.9
RHH5233_R3605
154.1
RHH5205_R3576
221.3
RHH5262_R3634
149.4
RHH5297_R3663
138.9
Memory CD4 T-cell TFH nTPM: 136.6
Samples: 4
Max nTPM: 156.7
Min nTPM: 110.0
RHH5300_R3666
124.3
RHH5236_R3608
156.7
RHH5265_R3637
110.0
RHH5208_R3579
155.5
Memory CD4 T-cell Th1 nTPM: 118.1
Samples: 4
Max nTPM: 144.9
Min nTPM: 85.8
RHH5210_R3581
123.3
RHH5302_R3668
118.3
RHH5238_R3610
85.8
RHH5267_R3639
144.9
Memory CD4 T-cell Th1/Th17 nTPM: 141.8
Samples: 4
Max nTPM: 172.3
Min nTPM: 118.2
RHH5303_R3669
140.0
RHH5211_R3582
172.3
RHH5239_R3611
118.2
RHH5268_R3640
136.5
Memory CD4 T-cell Th17 nTPM: 160.1
Samples: 4
Max nTPM: 182.0
Min nTPM: 144.3
RHH5304_R3670
144.3
RHH5212_R3583
152.9
RHH5240_R3612
182.0
RHH5269_R3641
161.3
Memory CD4 T-cell Th2 nTPM: 155.1
Samples: 4
Max nTPM: 174.4
Min nTPM: 135.2
RHH5305_R3671
135.2
RHH5213_R3584
174.4
RHH5241_R3613
165.1
RHH5270_R3642
145.5
Naive CD4 T-cell nTPM: 133.4
Samples: 4
Max nTPM: 163.0
Min nTPM: 98.4
RHH5306_R3672
123.6
RHH5214_R3585
163.0
RHH5242_R3614
98.4
RHH5271_R3643
148.6
Naive CD8 T-cell nTPM: 143.2
Samples: 4
Max nTPM: 199.6
Min nTPM: 116.4
RHH5201_R3572
199.6
RHH5229_R3601
131.8
RHH5258_R3630
116.4
RHH5287_R3659
125.1
Non-Vd2 gdTCR nTPM: 159.3
Samples: 4
Max nTPM: 188.5
Min nTPM: 127.0
RHH5235_R3607
188.5
RHH5264_R3636
147.7
RHH5207_R3578
173.8
RHH5299_R3665
127.0
T-reg nTPM: 122.8
Samples: 4
Max nTPM: 141.2
Min nTPM: 105.3
RHH5301_R3667
105.3
RHH5237_R3609
141.2
RHH5266_R3638
106.2
RHH5209_R3580
138.5
Terminal effector memory CD4 T-cell nTPM: 164.6
Samples: 2
Max nTPM: 194.9
Min nTPM: 134.3
RHH5243_R3615
194.9
RHH5272_R3644
134.3
Terminal effector memory CD8 T-cell nTPM: 142.7
Samples: 4
Max nTPM: 172.1
Min nTPM: 126.8
RHH5232_R3604
172.1
RHH5204_R3575
126.8
RHH5261_R3633
141.7
RHH5296_R3662
130.2
Vd2 gdTCR nTPM: 140.5
Samples: 4
Max nTPM: 179.4
Min nTPM: 119.7
RHH5234_R3606
135.5
RHH5206_R3577
119.7
RHH5263_R3635
179.4
RHH5298_R3664
127.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
