HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:32.0 nTPM
HPA Brain:28.4 nTPM
GTEx:32.0 nTPM
FANTOM5:44.5 Scaled Tags Per Million
Pig:34.4 nTPM
Mouse:52.9 nTPM
Allen mouse:1.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA064613
Glial cells Not detected
Neuronal cells Low


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 28.4
Sample id Sample description nTPM
Hippocampus
nTPM: 26.0
1898 Male, age 80, left hemisphere 28.9
2529 Female, age 94, left hemisphere 26.7
2621 Female, age 67, right hemisphere 26.0
1855 Male, age 76, left hemisphere 25.3
1911 Female, age 85, right hemisphere 24.5
2148 Female, age 91, left hemisphere 24.5
Dentate gyrus
nTPM: 25.4
2530 Female, age 94, left hemisphere 28.0
2010 Male, age 76, both hemispheres 27.2
2528 Male, age 74, both hemispheres 26.2
2246 Female, age 85, both hemispheres 24.7
1927 Female, age 91, both hemispheres 23.3
2531 Female, age 67, both hemispheres 22.8
Entorhinal gyrus
nTPM: 26.1
2117 Female, age 91, right hemisphere 29.8
2764 Male, age 80, right hemisphere 28.2
2613 Female, age 94, left hemisphere 26.6
1787 Male, age 76, left hemisphere 25.7
1938 Female, age 85, left hemisphere 24.5
2686 Male, age 75, right hemisphere 21.8
Hippocampus, CA1
nTPM: 26.9
2749 Male, age 80, left hemisphere 32.5
2527 Male, age 74, both hemispheres 26.8
1873 Female, age 85, both hemispheres 25.7
2045 Male, age 76, both hemispheres 25.4
2082 Female, age 91, right hemisphere 23.8
Hippocampus, CA2
nTPM: 25.9
2249 Male, age 74, both hemispheres 27.8
1963 Male, age 80, left hemisphere 27.7
1940 Female, age 85, left hemisphere 27.1
2113 Female, age 91, right hemisphere 25.2
2437 Female, age 94, left hemisphere 25.0
1892 Male, age 76, both hemispheres 22.9
Hippocampus, CA3
nTPM: 26.7
2620 Female, age 94, left hemisphere 32.5
2436 Male, age 74, both hemispheres 29.9
1867 Male, age 76, both hemispheres 25.4
2137 Male, age 80, left hemisphere 24.8
1891 Female, age 85, both hemispheres 24.7
2861 Female, age 67, both hemispheres 22.8
Parahippocampal cortex
nTPM: 26.1
1850 Male, age 80, both hemispheres 29.4
2532 Female, age 72, left hemisphere 29.2
1933 Female, age 85, both hemispheres 27.8
2250 Female, age 67, right hemisphere 26.6
1990 Female, age 91, right hemisphere 25.6
2245 Female, age 91, both hemispheres 24.9
2018 Male, age 76, both hemispheres 24.5
2622 Female, age 67, right hemisphere 24.5
2692 Male, age 74, both hemispheres 24.5
2693 Female, age 94, both hemispheres 24.0
Perirhinal gyrus
nTPM: 28.4
1794 Male, age 80, right hemisphere 32.1
1841 Female, age 85, right hemisphere 30.7
2521 Female, age 94, right hemisphere 28.0
1847 Female, age 91, left hemisphere 27.4
2848 Male, age 76, right hemisphere 23.9
Subiculum
nTPM: 25.9
2042 Male, age 76, both hemispheres 29.4
1977 Female, age 85, both hemispheres 27.3
2729 Female, age 91, right hemisphere 25.9
2619 Male, age 74, both hemispheres 25.2
1901 Male, age 80, both hemispheres 24.6
2438 Female, age 94, left hemisphere 22.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 32.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 32.0
Samples: 197

Max nTPM: 92.2
Min nTPM: 17.5
Std nTPM: 6.9
Median nTPM: 31.3
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 92.2
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 60.3
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 48.9
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 47.1
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 45.6
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 43.4
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 43.3
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 42.8
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 42.7
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 42.0
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 41.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 44.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 44.5
FF:10153-102I9 76 years, female 49.5
FF:10169-103B7 60 years, female 39.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 34.4
Pig sample Sample description nTPM
Subiculum
nTPM: 27.5
Samples: 4

Max nTPM: 33.2
Min nTPM: 24.8
Sample A Female 33.2
Sample B Female 26.4
Sample C Male 24.8
Sample D Male 25.5
Dorsal hippocampus
nTPM: 34.5
Samples: 4

Max nTPM: 45.5
Min nTPM: 24.6
Sample A Female 45.5
Sample B Female 35.1
Sample C Male 32.6
Sample D Male 24.6
Entorhinal cortex
nTPM: 28.5
Samples: 4

Max nTPM: 33.9
Min nTPM: 22.4
Sample A Female 27.4
Sample B Female 33.9
Sample C Male 30.2
Sample D Male 22.4
Ventral hippocampus
nTPM: 31.0
Samples: 4

Max nTPM: 35.9
Min nTPM: 25.1
Sample A Female 31.5
Sample B Female 25.1
Sample C Male 35.9
Sample D Male 31.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 52.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 47.6
Samples: 4

Max nTPM: 52.3
Min nTPM: 41.2
Sample A Male 45.4
Sample B Male 41.2
Sample C Female 51.3
Sample D Female 52.3
Hippocampal formation
nTPM: 53.0
Samples: 4

Max nTPM: 57.9
Min nTPM: 48.4
Sample A Male 48.4
Sample B Male 52.5
Sample C Female 57.9
Sample D Female 53.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.6
69080027 Antisense, RP_050324_01_E05, Mouse strain C57BL/6J (56 days, male) 1.6

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