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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
57.0
nTPM
Monaco:
146.0
nTPM
Schmiedel:
240.5
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
57.0
HPA sample
nTPM
gdT-cell nTPM: 52.0
Samples: 6
Max nTPM: 71.0
Min nTPM: 34.6
P10809_1007
50.1
P10809_1022
71.0
P10809_1041
52.6
P10809_1060
34.6
P10809_1077
54.5
P10809_1098
49.4
MAIT T-cell nTPM: 57.0
Samples: 6
Max nTPM: 69.7
Min nTPM: 43.6
P10809_1006
66.7
P10809_1024
53.6
P10809_1043
69.7
P10809_1062
54.3
P10809_1083
43.6
P10809_1097
53.8
Memory CD4 T-cell nTPM: 36.4
Samples: 6
Max nTPM: 39.5
Min nTPM: 31.9
P10809_1014
39.5
P10809_1026
36.0
P10809_1045
39.0
P10809_1064
33.2
P10809_1086
38.9
P10809_1113
31.9
Memory CD8 T-cell nTPM: 48.4
Samples: 5
Max nTPM: 59.1
Min nTPM: 38.5
P10809_1012
54.3
P10809_1027
46.6
P10809_1046
59.1
P10809_1065
38.5
P10809_1111
43.3
Naive CD4 T-cell nTPM: 22.1
Samples: 6
Max nTPM: 25.2
Min nTPM: 15.3
P10809_1015
24.1
P10809_1030
23.4
P10809_1049
15.3
P10809_1068
23.8
P10809_1085
25.2
P10809_1112
20.5
Naive CD8 T-cell nTPM: 34.7
Samples: 6
Max nTPM: 48.1
Min nTPM: 26.4
P10809_1016
27.1
P10809_1031
48.1
P10809_1050
32.4
P10809_1069
36.7
P10809_1087
37.6
P10809_1110
26.4
T-reg nTPM: 47.0
Samples: 6
Max nTPM: 56.1
Min nTPM: 38.9
P10809_1018
56.1
P10809_1037
45.2
P10809_1056
54.9
P10809_1075
43.2
P10809_1094
38.9
P10809_1106
43.5
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
146.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 99.0
Samples: 4
Max nTPM: 109.2
Min nTPM: 86.9
RHH5202_R3573
86.9
RHH5230_R3602
108.1
RHH5259_R3631
109.2
RHH5288_R3660
91.7
Effector memory CD8 T-cell nTPM: 137.1
Samples: 4
Max nTPM: 158.6
Min nTPM: 120.7
RHH5203_R3574
128.9
RHH5231_R3603
140.3
RHH5260_R3632
158.6
RHH5289_R3661
120.7
MAIT T-cell nTPM: 146.0
Samples: 4
Max nTPM: 158.5
Min nTPM: 124.1
RHH5233_R3605
158.5
RHH5205_R3576
154.6
RHH5262_R3634
146.8
RHH5297_R3663
124.1
Memory CD4 T-cell TFH nTPM: 73.8
Samples: 4
Max nTPM: 80.5
Min nTPM: 57.7
RHH5300_R3666
80.5
RHH5236_R3608
77.4
RHH5265_R3637
79.6
RHH5208_R3579
57.7
Memory CD4 T-cell Th1 nTPM: 82.5
Samples: 4
Max nTPM: 95.1
Min nTPM: 68.3
RHH5210_R3581
68.3
RHH5302_R3668
79.2
RHH5238_R3610
87.3
RHH5267_R3639
95.1
Memory CD4 T-cell Th1/Th17 nTPM: 113.9
Samples: 4
Max nTPM: 133.2
Min nTPM: 105.8
RHH5303_R3669
105.8
RHH5211_R3582
106.4
RHH5239_R3611
133.2
RHH5268_R3640
110.1
Memory CD4 T-cell Th17 nTPM: 107.3
Samples: 4
Max nTPM: 119.9
Min nTPM: 101.7
RHH5304_R3670
103.4
RHH5212_R3583
101.7
RHH5240_R3612
119.9
RHH5269_R3641
104.1
Memory CD4 T-cell Th2 nTPM: 102.1
Samples: 4
Max nTPM: 119.9
Min nTPM: 87.2
RHH5305_R3671
96.1
RHH5213_R3584
119.9
RHH5241_R3613
105.3
RHH5270_R3642
87.2
Naive CD4 T-cell nTPM: 53.0
Samples: 4
Max nTPM: 55.5
Min nTPM: 48.8
RHH5306_R3672
52.8
RHH5214_R3585
54.8
RHH5242_R3614
48.8
RHH5271_R3643
55.5
Naive CD8 T-cell nTPM: 56.1
Samples: 4
Max nTPM: 65.8
Min nTPM: 51.2
RHH5201_R3572
51.2
RHH5229_R3601
65.8
RHH5258_R3630
55.5
RHH5287_R3659
51.8
Non-Vd2 gdTCR nTPM: 133.6
Samples: 4
Max nTPM: 169.0
Min nTPM: 114.8
RHH5235_R3607
169.0
RHH5264_R3636
129.1
RHH5207_R3578
121.6
RHH5299_R3665
114.8
T-reg nTPM: 83.1
Samples: 4
Max nTPM: 96.7
Min nTPM: 76.3
RHH5301_R3667
76.3
RHH5237_R3609
96.7
RHH5266_R3638
79.4
RHH5209_R3580
79.8
Terminal effector memory CD4 T-cell nTPM: 129.0
Samples: 2
Max nTPM: 154.7
Min nTPM: 103.2
RHH5243_R3615
154.7
RHH5272_R3644
103.2
Terminal effector memory CD8 T-cell nTPM: 133.2
Samples: 4
Max nTPM: 162.5
Min nTPM: 115.4
RHH5232_R3604
134.9
RHH5204_R3575
115.4
RHH5261_R3633
162.5
RHH5296_R3662
119.8
Vd2 gdTCR nTPM: 124.0
Samples: 4
Max nTPM: 136.0
Min nTPM: 102.9
RHH5234_R3606
128.4
RHH5206_R3577
128.7
RHH5263_R3635
136.0
RHH5298_R3664
102.9
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
