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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
42.2
nTPM
Monaco:
12.2
nTPM
Schmiedel:
55.6
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
42.2
HPA sample
nTPM
gdT-cell nTPM: 24.4
Samples: 6
Max nTPM: 31.3
Min nTPM: 16.0
P10809_1007
16.0
P10809_1022
25.5
P10809_1041
31.3
P10809_1060
27.4
P10809_1077
24.5
P10809_1098
21.9
MAIT T-cell nTPM: 32.2
Samples: 6
Max nTPM: 41.5
Min nTPM: 20.0
P10809_1006
20.0
P10809_1024
32.6
P10809_1043
38.8
P10809_1062
36.2
P10809_1083
24.0
P10809_1097
41.5
Memory CD4 T-cell nTPM: 29.8
Samples: 6
Max nTPM: 32.8
Min nTPM: 19.9
P10809_1014
19.9
P10809_1026
32.8
P10809_1045
32.7
P10809_1064
32.1
P10809_1086
28.7
P10809_1113
32.8
Memory CD8 T-cell nTPM: 28.0
Samples: 5
Max nTPM: 36.4
Min nTPM: 21.2
P10809_1012
21.2
P10809_1027
25.4
P10809_1046
36.4
P10809_1065
24.4
P10809_1111
32.5
Naive CD4 T-cell nTPM: 28.0
Samples: 6
Max nTPM: 38.3
Min nTPM: 13.9
P10809_1015
13.9
P10809_1030
35.2
P10809_1049
38.3
P10809_1068
24.1
P10809_1085
29.7
P10809_1112
26.7
Naive CD8 T-cell nTPM: 26.7
Samples: 6
Max nTPM: 35.3
Min nTPM: 19.0
P10809_1016
19.0
P10809_1031
35.3
P10809_1050
32.0
P10809_1069
26.7
P10809_1087
21.8
P10809_1110
25.5
T-reg nTPM: 42.2
Samples: 6
Max nTPM: 89.4
Min nTPM: 26.8
P10809_1018
26.8
P10809_1037
35.3
P10809_1056
89.4
P10809_1075
27.4
P10809_1094
43.4
P10809_1106
31.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
12.2
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 12.2
Samples: 4
Max nTPM: 14.9
Min nTPM: 10.4
RHH5202_R3573
14.9
RHH5230_R3602
10.4
RHH5259_R3631
10.6
RHH5288_R3660
12.9
Effector memory CD8 T-cell nTPM: 6.6
Samples: 4
Max nTPM: 7.6
Min nTPM: 5.4
RHH5203_R3574
7.6
RHH5231_R3603
6.3
RHH5260_R3632
6.9
RHH5289_R3661
5.4
MAIT T-cell nTPM: 11.7
Samples: 4
Max nTPM: 14.2
Min nTPM: 10.0
RHH5233_R3605
10.2
RHH5205_R3576
12.2
RHH5262_R3634
10.0
RHH5297_R3663
14.2
Memory CD4 T-cell TFH nTPM: 9.4
Samples: 4
Max nTPM: 12.5
Min nTPM: 6.2
RHH5300_R3666
7.7
RHH5236_R3608
12.5
RHH5265_R3637
11.0
RHH5208_R3579
6.2
Memory CD4 T-cell Th1 nTPM: 10.8
Samples: 4
Max nTPM: 13.2
Min nTPM: 6.3
RHH5210_R3581
13.2
RHH5302_R3668
13.0
RHH5238_R3610
6.3
RHH5267_R3639
10.7
Memory CD4 T-cell Th1/Th17 nTPM: 9.2
Samples: 4
Max nTPM: 12.9
Min nTPM: 5.1
RHH5303_R3669
12.9
RHH5211_R3582
10.3
RHH5239_R3611
5.1
RHH5268_R3640
8.6
Memory CD4 T-cell Th17 nTPM: 8.2
Samples: 4
Max nTPM: 9.6
Min nTPM: 6.9
RHH5304_R3670
7.4
RHH5212_R3583
9.6
RHH5240_R3612
6.9
RHH5269_R3641
8.7
Memory CD4 T-cell Th2 nTPM: 9.2
Samples: 4
Max nTPM: 13.1
Min nTPM: 5.4
RHH5305_R3671
13.1
RHH5213_R3584
7.9
RHH5241_R3613
5.4
RHH5270_R3642
10.2
Naive CD4 T-cell nTPM: 8.7
Samples: 4
Max nTPM: 10.6
Min nTPM: 6.2
RHH5306_R3672
6.2
RHH5214_R3585
10.6
RHH5242_R3614
9.1
RHH5271_R3643
8.7
Naive CD8 T-cell nTPM: 8.5
Samples: 4
Max nTPM: 13.9
Min nTPM: 2.9
RHH5201_R3572
6.8
RHH5229_R3601
2.9
RHH5258_R3630
13.9
RHH5287_R3659
10.3
Non-Vd2 gdTCR nTPM: 10.9
Samples: 4
Max nTPM: 15.8
Min nTPM: 7.2
RHH5235_R3607
7.2
RHH5264_R3636
15.8
RHH5207_R3578
8.6
RHH5299_R3665
11.9
T-reg nTPM: 9.1
Samples: 4
Max nTPM: 13.8
Min nTPM: 6.6
RHH5301_R3667
13.8
RHH5237_R3609
6.6
RHH5266_R3638
8.1
RHH5209_R3580
8.0
Terminal effector memory CD4 T-cell nTPM: 7.2
Samples: 2
Max nTPM: 8.8
Min nTPM: 5.5
RHH5243_R3615
8.8
RHH5272_R3644
5.5
Terminal effector memory CD8 T-cell nTPM: 9.8
Samples: 4
Max nTPM: 14.9
Min nTPM: 7.2
RHH5232_R3604
7.2
RHH5204_R3575
14.9
RHH5261_R3633
9.8
RHH5296_R3662
7.2
Vd2 gdTCR nTPM: 11.4
Samples: 4
Max nTPM: 15.4
Min nTPM: 6.1
RHH5234_R3606
6.1
RHH5206_R3577
15.0
RHH5263_R3635
8.9
RHH5298_R3664
15.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
