HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:17.3 nTPM
HPA Brain:9.9 nTPM
GTEx:17.3 nTPM
FANTOM5:10.6 Scaled Tags Per Million
Pig:6.0 nTPM
Mouse:43.0 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPUS - Antibody stainingi
Antibody HPA020391
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 9.9
Sample id Sample description nTPM
Hippocampus
nTPM: 8.9
2529 Female, age 94, left hemisphere 10.9
2148 Female, age 91, left hemisphere 10.0
1855 Male, age 76, left hemisphere 8.4
2621 Female, age 67, right hemisphere 8.2
1898 Male, age 80, left hemisphere 7.9
1911 Female, age 85, right hemisphere 7.7
Dentate gyrus
nTPM: 8.4
2530 Female, age 94, left hemisphere 9.6
2528 Male, age 74, both hemispheres 8.7
2531 Female, age 67, both hemispheres 8.2
2010 Male, age 76, both hemispheres 8.1
2246 Female, age 85, both hemispheres 7.8
1927 Female, age 91, both hemispheres 7.6
Entorhinal gyrus
nTPM: 9.9
1787 Male, age 76, left hemisphere 10.6
2686 Male, age 75, right hemisphere 10.5
2117 Female, age 91, right hemisphere 10.4
2764 Male, age 80, right hemisphere 9.5
1938 Female, age 85, left hemisphere 9.4
2613 Female, age 94, left hemisphere 9.0
Hippocampus, CA1
nTPM: 8.3
2749 Male, age 80, left hemisphere 9.7
2082 Female, age 91, right hemisphere 9.6
2527 Male, age 74, both hemispheres 8.7
1873 Female, age 85, both hemispheres 7.0
2045 Male, age 76, both hemispheres 6.6
Hippocampus, CA2
nTPM: 8.5
2437 Female, age 94, left hemisphere 10.1
1963 Male, age 80, left hemisphere 9.4
2113 Female, age 91, right hemisphere 8.5
2249 Male, age 74, both hemispheres 8.1
1940 Female, age 85, left hemisphere 7.9
1892 Male, age 76, both hemispheres 7.2
Hippocampus, CA3
nTPM: 8.7
2861 Female, age 67, both hemispheres 10.1
2620 Female, age 94, left hemisphere 9.4
1867 Male, age 76, both hemispheres 8.5
2436 Male, age 74, both hemispheres 8.5
1891 Female, age 85, both hemispheres 8.2
2137 Male, age 80, left hemisphere 7.8
Parahippocampal cortex
nTPM: 8.9
2622 Female, age 67, right hemisphere 10.6
2692 Male, age 74, both hemispheres 10.2
2693 Female, age 94, both hemispheres 9.5
2532 Female, age 72, left hemisphere 9.2
1990 Female, age 91, right hemisphere 9.0
1933 Female, age 85, both hemispheres 8.9
1850 Male, age 80, both hemispheres 8.0
2018 Male, age 76, both hemispheres 8.0
2250 Female, age 67, right hemisphere 7.9
2245 Female, age 91, both hemispheres 7.7
Perirhinal gyrus
nTPM: 8.6
1794 Male, age 80, right hemisphere 10.6
2848 Male, age 76, right hemisphere 8.5
2521 Female, age 94, right hemisphere 8.2
1847 Female, age 91, left hemisphere 7.9
1841 Female, age 85, right hemisphere 7.8
Subiculum
nTPM: 9.4
2619 Male, age 74, both hemispheres 10.4
2729 Female, age 91, right hemisphere 10.1
2438 Female, age 94, left hemisphere 9.9
1977 Female, age 85, both hemispheres 9.3
2042 Male, age 76, both hemispheres 8.9
1901 Male, age 80, both hemispheres 7.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 17.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 17.3
Samples: 197

Max nTPM: 32.9
Min nTPM: 7.4
Std nTPM: 3.2
Median nTPM: 17.0
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 32.9
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 29.8
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 27.1
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 25.6
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 25.0
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 24.3
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 24.3
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 23.5
GTEX-13CF2-0011-R1a-SM-5LZY1 60-69 years, male 23.0
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 23.0
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 22.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 10.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 10.6
FF:10153-102I9 76 years, female 15.1
FF:10169-103B7 60 years, female 6.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 6.0
Pig sample Sample description nTPM
Subiculum
nTPM: 5.4
Samples: 4

Max nTPM: 5.7
Min nTPM: 5.1
Sample A Female 5.6
Sample B Female 5.2
Sample C Male 5.7
Sample D Male 5.1
Dorsal hippocampus
nTPM: 5.5
Samples: 4

Max nTPM: 5.9
Min nTPM: 5.0
Sample A Female 5.0
Sample B Female 5.9
Sample C Male 5.6
Sample D Male 5.6
Entorhinal cortex
nTPM: 6.0
Samples: 4

Max nTPM: 6.6
Min nTPM: 5.2
Sample A Female 5.2
Sample B Female 6.6
Sample C Male 6.4
Sample D Male 5.9
Ventral hippocampus
nTPM: 5.9
Samples: 4

Max nTPM: 7.8
Min nTPM: 4.8
Sample A Female 5.0
Sample B Female 4.8
Sample C Male 7.8
Sample D Male 6.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 43.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 41.4
Samples: 4

Max nTPM: 46.5
Min nTPM: 37.0
Sample A Male 37.0
Sample B Male 45.0
Sample C Female 46.5
Sample D Female 37.0
Hippocampal formation
nTPM: 43.0
Samples: 4

Max nTPM: 45.6
Min nTPM: 40.8
Sample A Male 43.6
Sample B Male 42.1
Sample C Female 40.8
Sample D Female 45.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
71763900 Antisense, RP_050921_02_G11, Mouse strain C57BL/6J (56 days, male) 0.0

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