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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
230.0
nTPM
GTEx:
230.0
nTPM
FANTOM5:
66.3
Scaled Tags Per Million
Pig:
5.9
nTPM
Mouse:
680.0
nTPM
RETINA - Annotated protein expression
Pending normal tissue analysis
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
230.0
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 230.0
Samples: 105
Max nTPM: 347.8
Min nTPM: 71.0
Std nTPM: 53.8
Median nTPM:
218_1
71 years, female
347.8
389_1
86 years, female
306.7
379_1
60 years, male
301.6
377_1
82 years, female
301.3
237_1
82 years, male
298.7
321_1
62 years, female
297.5
452_1
88 years, female
296.4
189_1
76 years, male
295.1
246_1
77 years, male
294.8
447_1
81 years, male
294.8
386_1
76 years, male
293.8
355_1
70 years, female
292.2
320_1
89 years, female
289.2
375_1
74 years, female
288.5
153_1
70 years, female
287.2
526_1
61 years, male
285.4
376_1
75 years, female
282.2
319_1
81 years, male
280.9
384_1
83 years, male
278.2
35_1
74 years, female
276.6
6_1
73 years, female
276.4
173_1
67 years, male
276.4
322_1
76 years, male
275.0
354_1
81 years, female
274.8
243_1
75 years, male
273.8
394_1
75 years, female
269.5
2_1
77 years, female
268.5
172_1
72 years, female
268.4
353_1
82 years, female
268.0
347_1
72 years, male
266.0
405_1
91 years, male
262.9
177_1
74 years, male
261.5
351_1
91 years, male
259.3
317_1
60 years, male
258.9
137_1
83 years, male
256.0
145_1
84 years, male
254.5
17_1
71 years, male
254.3
335_1
73 years, female
253.7
99_1
64 years, male
253.2
251_1
78 years, male
252.0
4_1
88 years, female
251.4
307_1
66 years, female
247.7
404_1
82 years, female
245.6
352_1
62 years, male
245.5
349_1
83 years, male
245.3
41_1
94 years, female
244.4
318_1
68 years, male
243.2
126_1
63 years, male
241.7
163_1
78 years, male
240.5
503_1
68 years, male
240.3
291_1
76 years, male
239.8
120_1
70 years, female
239.7
229_1
69 years, female
238.6
425_1
59 years, female
236.9
292_1
71 years, male
235.4
316_1
62 years, male
234.8
311_1
78 years, male
233.2
286_1
68 years, female
232.8
295_1
61 years, female
232.3
350_1
84 years, female
230.4
406_1
79 years, male
230.4
293_1
68 years, female
225.4
18_1
88 years, male
225.3
396_1
62 years, male
224.6
506_1
65 years, male
224.3
264_1
73 years, female
223.9
266_1
85 years, male
223.7
115_1
83 years, male
221.7
254_1
77 years, female
219.4
480_1
63 years, male
218.6
265_1
87 years, male
218.2
217_1
76 years, male
216.9
348_1
84 years, male
216.7
356_1
87 years, female
215.3
518_1
75 years, female
215.1
517_1
88 years, male
213.7
468_1
89 years, male
209.9
117_1
61 years, male
206.2
499_1
55 years, female
204.2
109_1
81 years, female
198.6
495_1
57 years, female
197.2
139_1
64 years, female
195.0
315_1
62 years, female
191.3
119_1
70 years, female
191.0
288_1
66 years, female
190.7
42_1
85 years, male
189.9
9_1
66 years, female
187.8
314_1
67 years, male
185.3
308_1
70 years, female
181.5
324_1
76 years, male
178.4
142_1
61 years, female
173.5
81_1
67 years, male
171.9
162_1
79 years, female
169.4
313_1
79 years, female
157.2
32_1
67 years, male
149.5
415_1
77 years, female
146.7
43_1
64 years, female
133.9
501_1
88 years, male
131.0
89_1
63 years, male
129.9
466_1
57 years, female
128.7
414_1
84 years, female
125.2
149_1
88 years, male
95.7
491_1
89 years, female
84.9
490_1
67 years, female
72.8
413_1
59 years, female
71.0
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.