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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
83.4
nTPM
Monaco:
67.3
nTPM
Schmiedel:
23.5
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
83.4
HPA sample
nTPM
gdT-cell nTPM: 48.6
Samples: 6
Max nTPM: 64.7
Min nTPM: 36.3
P10809_1007
41.8
P10809_1022
36.3
P10809_1041
54.0
P10809_1060
48.0
P10809_1077
46.8
P10809_1098
64.7
MAIT T-cell nTPM: 57.0
Samples: 6
Max nTPM: 71.6
Min nTPM: 43.2
P10809_1006
43.2
P10809_1024
71.6
P10809_1043
55.5
P10809_1062
50.0
P10809_1083
55.3
P10809_1097
66.1
Memory CD4 T-cell nTPM: 63.5
Samples: 6
Max nTPM: 76.2
Min nTPM: 51.5
P10809_1014
56.6
P10809_1026
51.5
P10809_1045
55.5
P10809_1064
69.1
P10809_1086
76.2
P10809_1113
71.9
Memory CD8 T-cell nTPM: 52.0
Samples: 5
Max nTPM: 61.5
Min nTPM: 45.1
P10809_1012
45.1
P10809_1027
53.0
P10809_1046
45.8
P10809_1065
54.5
P10809_1111
61.5
Naive CD4 T-cell nTPM: 40.1
Samples: 6
Max nTPM: 48.3
Min nTPM: 32.7
P10809_1015
39.4
P10809_1030
32.7
P10809_1049
45.3
P10809_1068
37.3
P10809_1085
48.3
P10809_1112
37.4
Naive CD8 T-cell nTPM: 48.9
Samples: 6
Max nTPM: 74.5
Min nTPM: 28.6
P10809_1016
43.8
P10809_1031
28.6
P10809_1050
43.1
P10809_1069
54.2
P10809_1087
74.5
P10809_1110
49.3
T-reg nTPM: 83.4
Samples: 6
Max nTPM: 129.3
Min nTPM: 51.8
P10809_1018
75.0
P10809_1037
129.3
P10809_1056
51.8
P10809_1075
60.9
P10809_1094
100.3
P10809_1106
83.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
67.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 36.9
Samples: 4
Max nTPM: 45.3
Min nTPM: 32.8
RHH5202_R3573
35.4
RHH5230_R3602
32.8
RHH5259_R3631
34.1
RHH5288_R3660
45.3
Effector memory CD8 T-cell nTPM: 42.1
Samples: 4
Max nTPM: 54.4
Min nTPM: 35.1
RHH5203_R3574
54.4
RHH5231_R3603
39.4
RHH5260_R3632
35.1
RHH5289_R3661
39.3
MAIT T-cell nTPM: 34.9
Samples: 4
Max nTPM: 63.0
Min nTPM: 16.4
RHH5233_R3605
32.9
RHH5205_R3576
27.3
RHH5262_R3634
16.4
RHH5297_R3663
63.0
Memory CD4 T-cell TFH nTPM: 67.3
Samples: 4
Max nTPM: 79.9
Min nTPM: 55.4
RHH5300_R3666
77.4
RHH5236_R3608
79.9
RHH5265_R3637
56.4
RHH5208_R3579
55.4
Memory CD4 T-cell Th1 nTPM: 48.9
Samples: 4
Max nTPM: 79.3
Min nTPM: 34.3
RHH5210_R3581
43.0
RHH5302_R3668
79.3
RHH5238_R3610
34.3
RHH5267_R3639
39.0
Memory CD4 T-cell Th1/Th17 nTPM: 47.1
Samples: 4
Max nTPM: 64.2
Min nTPM: 22.5
RHH5303_R3669
64.2
RHH5211_R3582
56.7
RHH5239_R3611
22.5
RHH5268_R3640
45.0
Memory CD4 T-cell Th17 nTPM: 36.0
Samples: 4
Max nTPM: 48.3
Min nTPM: 19.4
RHH5304_R3670
48.1
RHH5212_R3583
48.3
RHH5240_R3612
19.4
RHH5269_R3641
28.1
Memory CD4 T-cell Th2 nTPM: 40.7
Samples: 4
Max nTPM: 59.3
Min nTPM: 19.7
RHH5305_R3671
44.8
RHH5213_R3584
39.1
RHH5241_R3613
59.3
RHH5270_R3642
19.7
Naive CD4 T-cell nTPM: 31.1
Samples: 4
Max nTPM: 56.8
Min nTPM: 15.6
RHH5306_R3672
26.6
RHH5214_R3585
56.8
RHH5242_R3614
15.6
RHH5271_R3643
25.3
Naive CD8 T-cell nTPM: 23.6
Samples: 4
Max nTPM: 40.6
Min nTPM: 6.8
RHH5201_R3572
40.6
RHH5229_R3601
6.8
RHH5258_R3630
21.2
RHH5287_R3659
25.7
Non-Vd2 gdTCR nTPM: 39.5
Samples: 4
Max nTPM: 56.7
Min nTPM: 23.8
RHH5235_R3607
23.8
RHH5264_R3636
45.4
RHH5207_R3578
32.0
RHH5299_R3665
56.7
T-reg nTPM: 53.5
Samples: 4
Max nTPM: 81.2
Min nTPM: 19.5
RHH5301_R3667
62.0
RHH5237_R3609
81.2
RHH5266_R3638
19.5
RHH5209_R3580
51.2
Terminal effector memory CD4 T-cell nTPM: 31.3
Samples: 2
Max nTPM: 46.9
Min nTPM: 15.6
RHH5243_R3615
15.6
RHH5272_R3644
46.9
Terminal effector memory CD8 T-cell nTPM: 48.3
Samples: 4
Max nTPM: 78.2
Min nTPM: 29.8
RHH5232_R3604
29.8
RHH5204_R3575
78.2
RHH5261_R3633
35.8
RHH5296_R3662
49.2
Vd2 gdTCR nTPM: 45.9
Samples: 4
Max nTPM: 71.9
Min nTPM: 24.9
RHH5234_R3606
32.4
RHH5206_R3577
71.9
RHH5263_R3635
24.9
RHH5298_R3664
54.5
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
