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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
10.3
nTPM
Monaco:
54.4
nTPM
Schmiedel:
187.2
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
10.3
HPA sample
nTPM
gdT-cell nTPM: 6.7
Samples: 6
Max nTPM: 10.2
Min nTPM: 3.3
P10809_1007
10.2
P10809_1022
4.7
P10809_1041
8.9
P10809_1060
3.3
P10809_1077
5.7
P10809_1098
7.6
MAIT T-cell nTPM: 8.7
Samples: 6
Max nTPM: 15.4
Min nTPM: 3.5
P10809_1006
8.7
P10809_1024
10.8
P10809_1043
7.4
P10809_1062
3.5
P10809_1083
6.5
P10809_1097
15.4
Memory CD4 T-cell nTPM: 9.2
Samples: 6
Max nTPM: 13.1
Min nTPM: 6.0
P10809_1014
10.9
P10809_1026
11.0
P10809_1045
13.1
P10809_1064
8.2
P10809_1086
6.0
P10809_1113
6.0
Memory CD8 T-cell nTPM: 8.3
Samples: 5
Max nTPM: 11.7
Min nTPM: 5.2
P10809_1012
11.7
P10809_1027
8.1
P10809_1046
9.9
P10809_1065
5.2
P10809_1111
6.5
Naive CD4 T-cell nTPM: 7.9
Samples: 6
Max nTPM: 17.0
Min nTPM: 1.7
P10809_1015
8.0
P10809_1030
6.7
P10809_1049
17.0
P10809_1068
5.9
P10809_1085
8.0
P10809_1112
1.7
Naive CD8 T-cell nTPM: 6.2
Samples: 6
Max nTPM: 7.6
Min nTPM: 5.0
P10809_1016
7.6
P10809_1031
6.6
P10809_1050
7.5
P10809_1069
5.0
P10809_1087
5.2
P10809_1110
5.5
T-reg nTPM: 10.3
Samples: 6
Max nTPM: 15.4
Min nTPM: 4.3
P10809_1018
9.1
P10809_1037
11.9
P10809_1056
15.4
P10809_1075
6.8
P10809_1094
4.3
P10809_1106
14.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
54.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 34.5
Samples: 4
Max nTPM: 65.2
Min nTPM: 1.0
RHH5202_R3573
1.0
RHH5230_R3602
58.3
RHH5259_R3631
65.2
RHH5288_R3660
13.4
Effector memory CD8 T-cell nTPM: 40.5
Samples: 4
Max nTPM: 90.0
Min nTPM: 7.8
RHH5203_R3574
21.4
RHH5231_R3603
42.9
RHH5260_R3632
90.0
RHH5289_R3661
7.8
MAIT T-cell nTPM: 42.1
Samples: 4
Max nTPM: 76.0
Min nTPM: 19.1
RHH5233_R3605
19.1
RHH5205_R3576
34.9
RHH5262_R3634
76.0
RHH5297_R3663
38.3
Memory CD4 T-cell TFH nTPM: 17.0
Samples: 4
Max nTPM: 35.9
Min nTPM: 0.8
RHH5300_R3666
27.8
RHH5236_R3608
35.9
RHH5265_R3637
0.8
RHH5208_R3579
3.5
Memory CD4 T-cell Th1 nTPM: 39.0
Samples: 4
Max nTPM: 82.1
Min nTPM: 7.0
RHH5210_R3581
7.0
RHH5302_R3668
9.7
RHH5238_R3610
57.3
RHH5267_R3639
82.1
Memory CD4 T-cell Th1/Th17 nTPM: 54.5
Samples: 4
Max nTPM: 120.7
Min nTPM: 11.4
RHH5303_R3669
11.4
RHH5211_R3582
47.6
RHH5239_R3611
38.1
RHH5268_R3640
120.7
Memory CD4 T-cell Th17 nTPM: 44.3
Samples: 4
Max nTPM: 110.1
Min nTPM: 7.5
RHH5304_R3670
9.4
RHH5212_R3583
50.0
RHH5240_R3612
7.5
RHH5269_R3641
110.1
Memory CD4 T-cell Th2 nTPM: 35.1
Samples: 4
Max nTPM: 63.1
Min nTPM: 3.7
RHH5305_R3671
18.3
RHH5213_R3584
55.4
RHH5241_R3613
3.7
RHH5270_R3642
63.1
Naive CD4 T-cell nTPM: 24.3
Samples: 4
Max nTPM: 39.9
Min nTPM: 9.0
RHH5306_R3672
22.9
RHH5214_R3585
39.9
RHH5242_R3614
9.0
RHH5271_R3643
25.3
Naive CD8 T-cell nTPM: 26.7
Samples: 4
Max nTPM: 52.5
Min nTPM: 6.0
RHH5201_R3572
6.0
RHH5229_R3601
52.5
RHH5258_R3630
26.3
RHH5287_R3659
22.0
Non-Vd2 gdTCR nTPM: 25.0
Samples: 4
Max nTPM: 43.1
Min nTPM: 3.9
RHH5235_R3607
43.1
RHH5264_R3636
3.9
RHH5207_R3578
10.4
RHH5299_R3665
42.4
T-reg nTPM: 37.4
Samples: 4
Max nTPM: 61.0
Min nTPM: 26.5
RHH5301_R3667
26.5
RHH5237_R3609
35.2
RHH5266_R3638
61.0
RHH5209_R3580
26.9
Terminal effector memory CD4 T-cell nTPM: 30.9
Samples: 2
Max nTPM: 56.0
Min nTPM: 5.8
RHH5243_R3615
56.0
RHH5272_R3644
5.8
Terminal effector memory CD8 T-cell nTPM: 35.3
Samples: 4
Max nTPM: 96.1
Min nTPM: 6.1
RHH5232_R3604
6.1
RHH5204_R3575
30.1
RHH5261_R3633
96.1
RHH5296_R3662
9.0
Vd2 gdTCR nTPM: 39.7
Samples: 4
Max nTPM: 51.7
Min nTPM: 30.9
RHH5234_R3606
30.9
RHH5206_R3577
51.7
RHH5263_R3635
35.9
RHH5298_R3664
40.3
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
