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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
27.7
nTPM
Monaco:
39.2
nTPM
Schmiedel:
11.1
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
27.7
HPA sample
nTPM
gdT-cell nTPM: 27.0
Samples: 6
Max nTPM: 43.5
Min nTPM: 11.8
P10809_1007
15.0
P10809_1022
22.9
P10809_1041
43.5
P10809_1060
32.9
P10809_1077
11.8
P10809_1098
35.6
MAIT T-cell nTPM: 27.7
Samples: 6
Max nTPM: 32.8
Min nTPM: 18.5
P10809_1006
18.5
P10809_1024
31.8
P10809_1043
32.8
P10809_1062
26.6
P10809_1083
27.0
P10809_1097
29.6
Memory CD4 T-cell nTPM: 23.9
Samples: 6
Max nTPM: 47.1
Min nTPM: 11.6
P10809_1014
11.6
P10809_1026
47.1
P10809_1045
18.8
P10809_1064
24.2
P10809_1086
16.8
P10809_1113
25.0
Memory CD8 T-cell nTPM: 22.7
Samples: 5
Max nTPM: 28.7
Min nTPM: 11.4
P10809_1012
11.4
P10809_1027
26.0
P10809_1046
28.7
P10809_1065
26.8
P10809_1111
20.8
Naive CD4 T-cell nTPM: 18.7
Samples: 6
Max nTPM: 28.7
Min nTPM: 7.2
P10809_1015
12.6
P10809_1030
20.7
P10809_1049
28.7
P10809_1068
21.3
P10809_1085
7.2
P10809_1112
21.4
Naive CD8 T-cell nTPM: 19.2
Samples: 6
Max nTPM: 30.1
Min nTPM: 14.3
P10809_1016
16.4
P10809_1031
14.3
P10809_1050
18.3
P10809_1069
30.1
P10809_1087
16.3
P10809_1110
19.9
T-reg nTPM: 27.6
Samples: 6
Max nTPM: 57.2
Min nTPM: 14.1
P10809_1018
23.6
P10809_1037
24.5
P10809_1056
57.2
P10809_1075
27.0
P10809_1094
14.1
P10809_1106
18.9
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
39.2
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 31.4
Samples: 4
Max nTPM: 46.3
Min nTPM: 17.5
RHH5202_R3573
46.3
RHH5230_R3602
17.5
RHH5259_R3631
27.1
RHH5288_R3660
34.5
Effector memory CD8 T-cell nTPM: 34.4
Samples: 4
Max nTPM: 56.3
Min nTPM: 19.0
RHH5203_R3574
56.3
RHH5231_R3603
37.9
RHH5260_R3632
19.0
RHH5289_R3661
24.5
MAIT T-cell nTPM: 36.2
Samples: 4
Max nTPM: 38.9
Min nTPM: 29.0
RHH5233_R3605
38.9
RHH5205_R3576
38.9
RHH5262_R3634
29.0
RHH5297_R3663
38.1
Memory CD4 T-cell TFH nTPM: 35.1
Samples: 4
Max nTPM: 43.5
Min nTPM: 25.1
RHH5300_R3666
25.1
RHH5236_R3608
36.3
RHH5265_R3637
35.4
RHH5208_R3579
43.5
Memory CD4 T-cell Th1 nTPM: 31.2
Samples: 4
Max nTPM: 46.5
Min nTPM: 21.2
RHH5210_R3581
33.3
RHH5302_R3668
46.5
RHH5238_R3610
23.7
RHH5267_R3639
21.2
Memory CD4 T-cell Th1/Th17 nTPM: 39.2
Samples: 4
Max nTPM: 75.7
Min nTPM: 15.7
RHH5303_R3669
49.0
RHH5211_R3582
75.7
RHH5239_R3611
15.7
RHH5268_R3640
16.5
Memory CD4 T-cell Th17 nTPM: 32.5
Samples: 4
Max nTPM: 55.1
Min nTPM: 22.3
RHH5304_R3670
28.4
RHH5212_R3583
55.1
RHH5240_R3612
24.2
RHH5269_R3641
22.3
Memory CD4 T-cell Th2 nTPM: 34.7
Samples: 4
Max nTPM: 57.1
Min nTPM: 21.4
RHH5305_R3671
29.3
RHH5213_R3584
57.1
RHH5241_R3613
31.1
RHH5270_R3642
21.4
Naive CD4 T-cell nTPM: 23.2
Samples: 4
Max nTPM: 36.9
Min nTPM: 15.6
RHH5306_R3672
22.2
RHH5214_R3585
36.9
RHH5242_R3614
18.1
RHH5271_R3643
15.6
Naive CD8 T-cell nTPM: 22.2
Samples: 4
Max nTPM: 24.7
Min nTPM: 20.6
RHH5201_R3572
24.7
RHH5229_R3601
20.6
RHH5258_R3630
23.0
RHH5287_R3659
20.6
Non-Vd2 gdTCR nTPM: 32.5
Samples: 4
Max nTPM: 34.8
Min nTPM: 27.4
RHH5235_R3607
34.8
RHH5264_R3636
27.4
RHH5207_R3578
33.0
RHH5299_R3665
34.8
T-reg nTPM: 33.5
Samples: 4
Max nTPM: 47.4
Min nTPM: 21.4
RHH5301_R3667
21.4
RHH5237_R3609
47.4
RHH5266_R3638
23.2
RHH5209_R3580
41.9
Terminal effector memory CD4 T-cell nTPM: 28.7
Samples: 2
Max nTPM: 31.0
Min nTPM: 26.3
RHH5243_R3615
31.0
RHH5272_R3644
26.3
Terminal effector memory CD8 T-cell nTPM: 36.8
Samples: 4
Max nTPM: 50.0
Min nTPM: 15.3
RHH5232_R3604
41.6
RHH5204_R3575
50.0
RHH5261_R3633
15.3
RHH5296_R3662
40.4
Vd2 gdTCR nTPM: 35.8
Samples: 4
Max nTPM: 51.4
Min nTPM: 17.1
RHH5234_R3606
47.7
RHH5206_R3577
51.4
RHH5263_R3635
17.1
RHH5298_R3664
27.1
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
