HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:3.8 nTPM
HPA Brain:30.4 nTPM
GTEx:3.8 nTPM
FANTOM5:20.8 Scaled Tags Per Million
Pig:21.9 nTPM
Mouse:10.8 nTPM
Allen mouse:4.2 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 30.4
Sample id Sample description nTPM
Hippocampus
nTPM: 25.4
2148 Female, age 91, left hemisphere 29.4
2529 Female, age 94, left hemisphere 26.1
2621 Female, age 67, right hemisphere 25.9
1898 Male, age 80, left hemisphere 23.9
1855 Male, age 76, left hemisphere 23.4
1911 Female, age 85, right hemisphere 23.4
Dentate gyrus
nTPM: 27.4
2531 Female, age 67, both hemispheres 32.4
1927 Female, age 91, both hemispheres 29.2
2246 Female, age 85, both hemispheres 27.4
2528 Male, age 74, both hemispheres 26.2
2010 Male, age 76, both hemispheres 25.8
2530 Female, age 94, left hemisphere 23.3
Entorhinal gyrus
nTPM: 29.0
2613 Female, age 94, left hemisphere 32.6
2764 Male, age 80, right hemisphere 30.2
2686 Male, age 75, right hemisphere 28.8
1787 Male, age 76, left hemisphere 28.5
2117 Female, age 91, right hemisphere 27.6
1938 Female, age 85, left hemisphere 26.6
Hippocampus, CA1
nTPM: 24.6
2749 Male, age 80, left hemisphere 26.0
2527 Male, age 74, both hemispheres 25.8
2045 Male, age 76, both hemispheres 25.5
1873 Female, age 85, both hemispheres 24.5
2082 Female, age 91, right hemisphere 21.1
Hippocampus, CA2
nTPM: 25.7
1892 Male, age 76, both hemispheres 29.4
2249 Male, age 74, both hemispheres 27.1
2437 Female, age 94, left hemisphere 26.8
1963 Male, age 80, left hemisphere 24.9
2113 Female, age 91, right hemisphere 24.1
1940 Female, age 85, left hemisphere 21.8
Hippocampus, CA3
nTPM: 30.4
2436 Male, age 74, both hemispheres 48.9
2861 Female, age 67, both hemispheres 30.4
2620 Female, age 94, left hemisphere 29.3
1891 Female, age 85, both hemispheres 25.0
2137 Male, age 80, left hemisphere 24.7
1867 Male, age 76, both hemispheres 23.8
Parahippocampal cortex
nTPM: 27.0
2622 Female, age 67, right hemisphere 30.6
1990 Female, age 91, right hemisphere 29.1
2692 Male, age 74, both hemispheres 28.4
2532 Female, age 72, left hemisphere 28.0
2250 Female, age 67, right hemisphere 27.2
2245 Female, age 91, both hemispheres 26.8
2693 Female, age 94, both hemispheres 25.8
1933 Female, age 85, both hemispheres 25.1
1850 Male, age 80, both hemispheres 24.7
2018 Male, age 76, both hemispheres 23.9
Perirhinal gyrus
nTPM: 26.6
1847 Female, age 91, left hemisphere 28.3
1794 Male, age 80, right hemisphere 27.5
2848 Male, age 76, right hemisphere 26.2
2521 Female, age 94, right hemisphere 26.0
1841 Female, age 85, right hemisphere 25.1
Subiculum
nTPM: 26.5
2438 Female, age 94, left hemisphere 31.3
1977 Female, age 85, both hemispheres 28.9
2619 Male, age 74, both hemispheres 26.7
1901 Male, age 80, both hemispheres 24.9
2729 Female, age 91, right hemisphere 23.9
2042 Male, age 76, both hemispheres 23.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 3.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 3.8
Samples: 197

Max nTPM: 7.5
Min nTPM: 1.1
Std nTPM: 1.0
Median nTPM: 3.7
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 7.5
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 6.7
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 6.6
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 6.6
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 6.5
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 6.3
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 5.7
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 5.7
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 5.7
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 5.5
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 5.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 20.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 20.8
FF:10153-102I9 76 years, female 26.1
FF:10169-103B7 60 years, female 15.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 21.9
Pig sample Sample description nTPM
Subiculum
nTPM: 18.9
Samples: 4

Max nTPM: 22.1
Min nTPM: 17.0
Sample A Female 22.1
Sample B Female 17.0
Sample C Male 19.5
Sample D Male 17.1
Dorsal hippocampus
nTPM: 20.9
Samples: 4

Max nTPM: 23.2
Min nTPM: 16.5
Sample A Female 22.5
Sample B Female 23.2
Sample C Male 16.5
Sample D Male 21.5
Entorhinal cortex
nTPM: 18.5
Samples: 4

Max nTPM: 20.0
Min nTPM: 16.3
Sample A Female 20.0
Sample B Female 19.4
Sample C Male 18.3
Sample D Male 16.3
Ventral hippocampus
nTPM: 21.9
Samples: 4

Max nTPM: 25.5
Min nTPM: 17.9
Sample A Female 23.9
Sample B Female 17.9
Sample C Male 25.5
Sample D Male 20.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 10.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 9.3
Samples: 4

Max nTPM: 11.2
Min nTPM: 8.4
Sample A Male 8.6
Sample B Male 8.4
Sample C Female 9.0
Sample D Female 11.2
Hippocampal formation
nTPM: 10.8
Samples: 4

Max nTPM: 12.3
Min nTPM: 7.8
Sample A Male 7.8
Sample B Male 11.1
Sample C Female 12.3
Sample D Female 11.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.2
74581378 Antisense, RP_051130_01_D09, Mouse strain C57BL/6J (56 days, male) 4.2
73606675 Antisense, RP_051130_01_D09, Mouse strain C57BL/6J (56 days, male) 3.8

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