We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
398.7
nTPM
Monaco:
137.2
nTPM
Schmiedel:
474.6
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
398.7
HPA sample
nTPM
gdT-cell nTPM: 78.1
Samples: 6
Max nTPM: 93.4
Min nTPM: 67.1
P10809_1007
77.8
P10809_1022
87.0
P10809_1041
93.4
P10809_1060
67.8
P10809_1077
67.1
P10809_1098
75.3
MAIT T-cell nTPM: 83.1
Samples: 6
Max nTPM: 125.0
Min nTPM: 58.3
P10809_1006
58.3
P10809_1024
80.0
P10809_1043
81.4
P10809_1062
73.9
P10809_1083
79.8
P10809_1097
125.0
Memory CD4 T-cell nTPM: 170.2
Samples: 6
Max nTPM: 203.0
Min nTPM: 129.3
P10809_1014
142.3
P10809_1026
198.8
P10809_1045
193.5
P10809_1064
129.3
P10809_1086
154.0
P10809_1113
203.0
Memory CD8 T-cell nTPM: 135.0
Samples: 5
Max nTPM: 178.9
Min nTPM: 83.8
P10809_1012
127.4
P10809_1027
162.4
P10809_1046
122.4
P10809_1065
83.8
P10809_1111
178.9
Naive CD4 T-cell nTPM: 398.7
Samples: 6
Max nTPM: 492.7
Min nTPM: 336.3
P10809_1015
345.8
P10809_1030
406.0
P10809_1049
492.7
P10809_1068
336.3
P10809_1085
361.4
P10809_1112
450.1
Naive CD8 T-cell nTPM: 304.3
Samples: 6
Max nTPM: 485.2
Min nTPM: 122.6
P10809_1016
367.5
P10809_1031
326.7
P10809_1050
306.7
P10809_1069
217.1
P10809_1087
122.6
P10809_1110
485.2
T-reg nTPM: 202.9
Samples: 6
Max nTPM: 243.9
Min nTPM: 152.0
P10809_1018
152.0
P10809_1037
170.3
P10809_1056
189.0
P10809_1075
227.5
P10809_1094
234.9
P10809_1106
243.9
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
137.2
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 65.0
Samples: 4
Max nTPM: 92.1
Min nTPM: 43.9
RHH5202_R3573
67.6
RHH5230_R3602
43.9
RHH5259_R3631
56.3
RHH5288_R3660
92.1
Effector memory CD8 T-cell nTPM: 23.2
Samples: 4
Max nTPM: 34.8
Min nTPM: 16.2
RHH5203_R3574
34.8
RHH5231_R3603
22.4
RHH5260_R3632
19.3
RHH5289_R3661
16.2
MAIT T-cell nTPM: 23.7
Samples: 4
Max nTPM: 39.4
Min nTPM: 13.2
RHH5233_R3605
13.2
RHH5205_R3576
22.4
RHH5262_R3634
19.6
RHH5297_R3663
39.4
Memory CD4 T-cell TFH nTPM: 62.8
Samples: 4
Max nTPM: 86.0
Min nTPM: 47.0
RHH5300_R3666
47.0
RHH5236_R3608
86.0
RHH5265_R3637
54.3
RHH5208_R3579
63.7
Memory CD4 T-cell Th1 nTPM: 84.7
Samples: 4
Max nTPM: 119.6
Min nTPM: 68.0
RHH5210_R3581
76.6
RHH5302_R3668
119.6
RHH5238_R3610
74.5
RHH5267_R3639
68.0
Memory CD4 T-cell Th1/Th17 nTPM: 54.6
Samples: 4
Max nTPM: 67.7
Min nTPM: 39.5
RHH5303_R3669
67.7
RHH5211_R3582
66.3
RHH5239_R3611
39.5
RHH5268_R3640
44.7
Memory CD4 T-cell Th17 nTPM: 38.4
Samples: 4
Max nTPM: 58.5
Min nTPM: 25.3
RHH5304_R3670
36.1
RHH5212_R3583
58.5
RHH5240_R3612
25.3
RHH5269_R3641
33.8
Memory CD4 T-cell Th2 nTPM: 54.6
Samples: 4
Max nTPM: 68.6
Min nTPM: 40.8
RHH5305_R3671
64.5
RHH5213_R3584
44.5
RHH5241_R3613
68.6
RHH5270_R3642
40.8
Naive CD4 T-cell nTPM: 117.5
Samples: 4
Max nTPM: 159.6
Min nTPM: 97.6
RHH5306_R3672
97.6
RHH5214_R3585
159.6
RHH5242_R3614
110.1
RHH5271_R3643
102.7
Naive CD8 T-cell nTPM: 137.2
Samples: 4
Max nTPM: 184.5
Min nTPM: 113.3
RHH5201_R3572
125.4
RHH5229_R3601
113.3
RHH5258_R3630
184.5
RHH5287_R3659
125.6
Non-Vd2 gdTCR nTPM: 21.6
Samples: 4
Max nTPM: 25.2
Min nTPM: 19.5
RHH5235_R3607
19.5
RHH5264_R3636
25.2
RHH5207_R3578
20.3
RHH5299_R3665
21.5
T-reg nTPM: 69.6
Samples: 4
Max nTPM: 85.0
Min nTPM: 52.4
RHH5301_R3667
85.0
RHH5237_R3609
69.3
RHH5266_R3638
52.4
RHH5209_R3580
71.7
Terminal effector memory CD4 T-cell nTPM: 27.8
Samples: 2
Max nTPM: 39.5
Min nTPM: 16.1
RHH5243_R3615
16.1
RHH5272_R3644
39.5
Terminal effector memory CD8 T-cell nTPM: 32.1
Samples: 4
Max nTPM: 62.2
Min nTPM: 17.2
RHH5232_R3604
17.2
RHH5204_R3575
62.2
RHH5261_R3633
19.9
RHH5296_R3662
28.9
Vd2 gdTCR nTPM: 52.2
Samples: 4
Max nTPM: 75.4
Min nTPM: 34.4
RHH5234_R3606
34.4
RHH5206_R3577
60.9
RHH5263_R3635
37.9
RHH5298_R3664
75.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
