HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:21.8 nTPM
HPA Brain:13.3 nTPM
GTEx:21.8 nTPM
FANTOM5:17.8 Scaled Tags Per Million
Pig:0.4 nTPM
Mouse:2.1 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA068955Antibody CAB016075
Glial cells Not detectedNot detected
Neuronal cells Not detectedLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 13.3
Sample id Sample description nTPM
Hippocampus
nTPM: 10.2
1855 Male, age 76, left hemisphere 13.9
1898 Male, age 80, left hemisphere 11.6
1911 Female, age 85, right hemisphere 11.3
2529 Female, age 94, left hemisphere 9.8
2621 Female, age 67, right hemisphere 9.0
2148 Female, age 91, left hemisphere 5.7
Dentate gyrus
nTPM: 11.4
2010 Male, age 76, both hemispheres 26.8
2528 Male, age 74, both hemispheres 10.5
2530 Female, age 94, left hemisphere 10.2
2246 Female, age 85, both hemispheres 8.4
2531 Female, age 67, both hemispheres 7.6
1927 Female, age 91, both hemispheres 4.7
Entorhinal gyrus
nTPM: 6.7
1787 Male, age 76, left hemisphere 10.5
2117 Female, age 91, right hemisphere 7.5
2686 Male, age 75, right hemisphere 5.9
2764 Male, age 80, right hemisphere 5.7
2613 Female, age 94, left hemisphere 5.6
1938 Female, age 85, left hemisphere 5.0
Hippocampus, CA1
nTPM: 13.3
2045 Male, age 76, both hemispheres 22.5
2527 Male, age 74, both hemispheres 13.7
2082 Female, age 91, right hemisphere 13.0
2749 Male, age 80, left hemisphere 9.8
1873 Female, age 85, both hemispheres 7.3
Hippocampus, CA2
nTPM: 11.2
2249 Male, age 74, both hemispheres 20.2
1940 Female, age 85, left hemisphere 11.9
2437 Female, age 94, left hemisphere 11.6
2113 Female, age 91, right hemisphere 9.5
1892 Male, age 76, both hemispheres 8.3
1963 Male, age 80, left hemisphere 5.7
Hippocampus, CA3
nTPM: 11.7
2436 Male, age 74, both hemispheres 20.6
1867 Male, age 76, both hemispheres 15.7
2137 Male, age 80, left hemisphere 13.3
1891 Female, age 85, both hemispheres 7.5
2861 Female, age 67, both hemispheres 7.4
2620 Female, age 94, left hemisphere 5.5
Parahippocampal cortex
nTPM: 8.1
2018 Male, age 76, both hemispheres 32.1
2692 Male, age 74, both hemispheres 8.6
2532 Female, age 72, left hemisphere 6.5
1990 Female, age 91, right hemisphere 6.4
2245 Female, age 91, both hemispheres 5.8
1850 Male, age 80, both hemispheres 5.0
2250 Female, age 67, right hemisphere 4.5
2693 Female, age 94, both hemispheres 4.3
2622 Female, age 67, right hemisphere 4.2
1933 Female, age 85, both hemispheres 3.9
Perirhinal gyrus
nTPM: 4.9
1841 Female, age 85, right hemisphere 5.8
2521 Female, age 94, right hemisphere 5.5
2848 Male, age 76, right hemisphere 5.1
1794 Male, age 80, right hemisphere 4.2
1847 Female, age 91, left hemisphere 3.7
Subiculum
nTPM: 10.1
2042 Male, age 76, both hemispheres 17.7
1901 Male, age 80, both hemispheres 13.7
2619 Male, age 74, both hemispheres 7.9
2438 Female, age 94, left hemisphere 7.6
1977 Female, age 85, both hemispheres 7.2
2729 Female, age 91, right hemisphere 6.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 21.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 21.8
Samples: 197

Max nTPM: 258.0
Min nTPM: 1.2
Std nTPM: 30.6
Median nTPM: 12.4
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 258.0
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 188.9
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 170.4
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 147.8
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 99.6
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 82.5
GTEX-16XZZ-0011-R1a-SM-7LTAH 60-69 years, male 77.3
GTEX-1I1GS-0011-R1a-SM-CJI43 60-69 years, male 77.3
GTEX-13SLW-0011-R1a-SM-5S2W7 70-79 years, male 71.6
GTEX-17EVQ-0011-R1a-SM-7189S 70-79 years, male 69.4
GTEX-1EH9U-0011-R1b-SM-CJI2B 60-69 years, male 68.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 17.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 17.8
FF:10153-102I9 76 years, female 28.3
FF:10169-103B7 60 years, female 7.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 0.4
Pig sample Sample description nTPM
Subiculum
nTPM: 0.5
Samples: 4

Max nTPM: 0.9
Min nTPM: 0.1
Sample A Female 0.4
Sample B Female 0.1
Sample C Male 0.4
Sample D Male 0.9
Dorsal hippocampus
nTPM: 0.3
Samples: 4

Max nTPM: 0.5
Min nTPM: 0.1
Sample A Female 0.2
Sample B Female 0.1
Sample C Male 0.5
Sample D Male 0.4
Entorhinal cortex
nTPM: 0.4
Samples: 4

Max nTPM: 0.6
Min nTPM: 0.1
Sample A Female 0.6
Sample B Female 0.1
Sample C Male 0.5
Sample D Male 0.3
Ventral hippocampus
nTPM: 0.3
Samples: 4

Max nTPM: 0.6
Min nTPM: 0.1
Sample A Female 0.2
Sample B Female 0.1
Sample C Male 0.6
Sample D Male 0.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 2.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 2.1
Samples: 4

Max nTPM: 2.2
Min nTPM: 1.9
Sample A Male 2.2
Sample B Male 2.1
Sample C Female 2.1
Sample D Female 1.9
Hippocampal formation
nTPM: 1.5
Samples: 4

Max nTPM: 2.0
Min nTPM: 1.1
Sample A Male 1.6
Sample B Male 1.1
Sample C Female 1.3
Sample D Female 2.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
68667655 Antisense, RP_050201_02_F06, Mouse strain C57BL/6J (56 days, male) 0.1
74819251 Antisense, RP_060315_02_D03, Mouse strain C57BL/6J (56 days, male) 0.1

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