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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
39.7
nTPM
HPA Brain:
8.9
nTPM
GTEx:
39.7
nTPM
FANTOM5:
18.0
Scaled Tags Per Million
Pig:
15.0
nTPM
Mouse:
42.6
nTPM
AMYGDALA - HPA Brain RNA-seq
Max nTPM
8.9
Sample id
Sample description
nTPM
Amygdala nTPM: 8.9
2814
Male, age 76, right hemisphere
10.7
2695
Female, age 67, right hemisphere
9.3
1987
Female, age 91, left hemisphere
8.5
2514
Male, age 75, right hemisphere
7.9
2517
Female, age 94, left hemisphere
7.9
Basal amygdala nTPM: 5.9
1955
Male, age 76, both hemispheres
8.2
2110
Male, age 80, left hemisphere
7.9
2685
Female, age 94, left hemisphere
6.1
2609
Male, age 75, right hemisphere
5.4
2243
Female, age 91, right hemisphere
5.1
2827
Female, age 67, right hemisphere
2.6
Central amygdala nTPM: 7.0
1905
Male, age 76, both hemispheres
8.8
2826
Female, age 94, left hemisphere
8.5
2239
Male, age 80, left hemisphere
7.2
2701
Female, age 91, right hemisphere
5.9
2515
Male, age 75, right hemisphere
4.5
Corticomedial amygdala nTPM: 6.0
2829
Male, age 80, left hemisphere
8.4
2429
Female, age 94, left hemisphere
7.3
2428
Male, age 75, right hemisphere
6.8
2240
Male, age 76, both hemispheres
6.5
2242
Female, age 91, right hemisphere
5.1
2535
Female, age 67, right hemisphere
1.9
Lateral amygdala nTPM: 6.1
2516
Male, age 75, right hemisphere
9.8
1883
Male, age 76, both hemispheres
7.2
2534
Female, age 94, left hemisphere
5.8
2255
Female, age 91, right hemisphere
5.5
2830
Female, age 67, right hemisphere
5.3
2256
Male, age 80, left hemisphere
3.3
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
39.7
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 39.7
Samples: 152
Max nTPM: 162.0
Min nTPM: 10.2
Std nTPM: 18.2
Median nTPM: 36.9
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
162.0
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
108.0
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
93.0
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
92.7
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
89.1
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
83.7
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
79.7
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
78.4
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
76.9
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
71.0
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
67.1
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
66.5
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
61.9
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
59.7
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
58.5
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
57.0
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
53.8
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
53.0
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
51.2
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
49.6
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
49.4
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
47.5
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
47.4
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
47.1
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
46.5
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
46.0
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
45.6
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
45.4
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
44.9
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
44.8
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
44.1
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
43.5
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
43.4
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
43.4
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
43.4
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
43.2
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
43.2
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
42.9
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
42.6
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
42.4
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
42.4
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
42.2
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
42.0
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
42.0
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
42.0
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
42.0
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
41.8
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
41.7
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
41.6
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
41.4
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
41.0
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
41.0
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
40.9
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
40.2
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
40.0
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
39.9
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
39.8
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
39.8
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
39.6
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
39.5
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
39.2
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
39.1
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
39.0
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
38.9
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
38.8
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
38.4
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
38.3
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
38.3
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
38.2
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
37.9
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
37.9
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
37.7
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
37.5
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
37.5
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
37.3
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
37.0
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
36.8
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
36.6
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
36.3
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
36.1
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
36.0
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
36.0
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
35.9
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
35.7
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
35.6
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
35.5
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
35.3
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
35.2
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
35.2
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
35.0
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
34.9
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
34.9
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
33.7
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
33.0
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
32.7
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
32.4
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
32.3
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
32.2
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
32.2
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
32.0
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
31.9
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
31.8
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
31.5
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
31.0
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
30.7
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
30.7
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
30.7
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
30.4
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
30.0
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
29.9
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
29.9
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
29.9
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
29.9
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
29.6
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
29.5
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
29.4
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
29.4
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
29.3
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
29.1
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
29.1
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
28.8
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
28.4
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
28.3
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
28.2
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
28.1
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
27.6
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
26.7
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
26.6
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
26.2
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
26.1
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
26.0
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
26.0
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
25.8
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
25.7
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
25.0
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
24.9
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
24.7
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
24.7
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
24.1
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
23.8
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
23.5
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
22.8
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
22.4
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
22.3
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
21.6
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
21.5
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
21.2
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
19.5
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
18.9
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
17.4
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
12.9
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
10.2
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.