HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:33.7 nTPM
HPA Brain:8.7 nTPM
GTEx:33.7 nTPM
FANTOM5:23.4 Scaled Tags Per Million
Pig:19.1 nTPM
Mouse:43.6 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA058308
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 8.7
Sample id Sample description nTPM
Hippocampus
nTPM: 8.3
2529 Female, age 94, left hemisphere 10.6
1898 Male, age 80, left hemisphere 9.8
1855 Male, age 76, left hemisphere 9.3
2621 Female, age 67, right hemisphere 8.2
1911 Female, age 85, right hemisphere 6.3
2148 Female, age 91, left hemisphere 5.4
Dentate gyrus
nTPM: 5.7
2010 Male, age 76, both hemispheres 9.0
1927 Female, age 91, both hemispheres 7.1
2246 Female, age 85, both hemispheres 5.1
2531 Female, age 67, both hemispheres 4.7
2528 Male, age 74, both hemispheres 4.2
2530 Female, age 94, left hemisphere 3.9
Entorhinal gyrus
nTPM: 6.8
1787 Male, age 76, left hemisphere 8.4
2764 Male, age 80, right hemisphere 8.2
2686 Male, age 75, right hemisphere 7.7
2117 Female, age 91, right hemisphere 6.1
1938 Female, age 85, left hemisphere 5.7
2613 Female, age 94, left hemisphere 4.8
Hippocampus, CA1
nTPM: 8.7
2749 Male, age 80, left hemisphere 11.6
1873 Female, age 85, both hemispheres 9.6
2045 Male, age 76, both hemispheres 7.8
2082 Female, age 91, right hemisphere 7.2
2527 Male, age 74, both hemispheres 7.1
Hippocampus, CA2
nTPM: 8.4
1963 Male, age 80, left hemisphere 12.1
1892 Male, age 76, both hemispheres 10.3
2249 Male, age 74, both hemispheres 10.2
2113 Female, age 91, right hemisphere 6.5
2437 Female, age 94, left hemisphere 6.2
1940 Female, age 85, left hemisphere 5.0
Hippocampus, CA3
nTPM: 7.8
1891 Female, age 85, both hemispheres 9.9
1867 Male, age 76, both hemispheres 9.5
2620 Female, age 94, left hemisphere 8.0
2137 Male, age 80, left hemisphere 7.2
2436 Male, age 74, both hemispheres 7.1
2861 Female, age 67, both hemispheres 4.9
Parahippocampal cortex
nTPM: 7.6
1933 Female, age 85, both hemispheres 9.8
2018 Male, age 76, both hemispheres 8.9
2693 Female, age 94, both hemispheres 8.3
1850 Male, age 80, both hemispheres 7.8
2250 Female, age 67, right hemisphere 7.6
2622 Female, age 67, right hemisphere 7.5
2532 Female, age 72, left hemisphere 7.2
1990 Female, age 91, right hemisphere 6.7
2245 Female, age 91, both hemispheres 6.0
2692 Male, age 74, both hemispheres 5.8
Perirhinal gyrus
nTPM: 8.6
1841 Female, age 85, right hemisphere 10.3
1847 Female, age 91, left hemisphere 9.5
2521 Female, age 94, right hemisphere 8.0
2848 Male, age 76, right hemisphere 7.5
1794 Male, age 80, right hemisphere 7.4
Subiculum
nTPM: 6.6
1977 Female, age 85, both hemispheres 10.4
1901 Male, age 80, both hemispheres 7.1
2729 Female, age 91, right hemisphere 7.0
2619 Male, age 74, both hemispheres 6.5
2042 Male, age 76, both hemispheres 6.2
2438 Female, age 94, left hemisphere 2.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 33.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 33.7
Samples: 197

Max nTPM: 158.0
Min nTPM: 9.9
Std nTPM: 14.8
Median nTPM: 32.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 158.0
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 90.1
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 60.2
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 59.9
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 59.6
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 57.7
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 56.8
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 56.5
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 54.8
GTEX-11GS4-0011-R1a-SM-DO129 60-69 years, male 54.3
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 54.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 23.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 23.4
FF:10169-103B7 60 years, female 29.0
FF:10153-102I9 76 years, female 17.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 19.1
Pig sample Sample description nTPM
Subiculum
nTPM: 16.6
Samples: 4

Max nTPM: 20.2
Min nTPM: 14.2
Sample A Female 20.2
Sample B Female 16.0
Sample C Male 14.2
Sample D Male 16.1
Dorsal hippocampus
nTPM: 19.1
Samples: 4

Max nTPM: 24.7
Min nTPM: 15.0
Sample A Female 24.7
Sample B Female 16.7
Sample C Male 19.8
Sample D Male 15.0
Entorhinal cortex
nTPM: 18.8
Samples: 4

Max nTPM: 23.8
Min nTPM: 13.7
Sample A Female 18.5
Sample B Female 23.8
Sample C Male 19.2
Sample D Male 13.7
Ventral hippocampus
nTPM: 15.2
Samples: 4

Max nTPM: 16.2
Min nTPM: 14.4
Sample A Female 15.6
Sample B Female 16.2
Sample C Male 14.7
Sample D Male 14.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 43.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 40.8
Samples: 4

Max nTPM: 42.2
Min nTPM: 37.9
Sample A Male 41.0
Sample B Male 41.9
Sample C Female 42.2
Sample D Female 37.9
Hippocampal formation
nTPM: 43.6
Samples: 4

Max nTPM: 47.5
Min nTPM: 40.3
Sample A Male 47.5
Sample B Male 42.9
Sample C Female 40.3
Sample D Female 43.7

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