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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
156.9
nTPM
Monaco:
319.0
nTPM
Schmiedel:
170.3
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
156.9
HPA sample
nTPM
gdT-cell nTPM: 99.9
Samples: 6
Max nTPM: 109.4
Min nTPM: 88.2
P10809_1007
90.2
P10809_1022
109.4
P10809_1041
108.8
P10809_1060
88.2
P10809_1077
95.0
P10809_1098
107.9
MAIT T-cell nTPM: 137.9
Samples: 6
Max nTPM: 181.6
Min nTPM: 112.4
P10809_1006
119.4
P10809_1024
181.6
P10809_1043
112.4
P10809_1062
137.9
P10809_1083
129.4
P10809_1097
146.6
Memory CD4 T-cell nTPM: 137.3
Samples: 6
Max nTPM: 156.0
Min nTPM: 123.8
P10809_1014
134.6
P10809_1026
156.0
P10809_1045
138.2
P10809_1064
128.4
P10809_1086
142.9
P10809_1113
123.8
Memory CD8 T-cell nTPM: 127.2
Samples: 5
Max nTPM: 149.2
Min nTPM: 113.0
P10809_1012
121.2
P10809_1027
149.2
P10809_1046
121.2
P10809_1065
113.0
P10809_1111
131.6
Naive CD4 T-cell nTPM: 141.6
Samples: 6
Max nTPM: 164.7
Min nTPM: 128.4
P10809_1015
164.7
P10809_1030
144.8
P10809_1049
144.1
P10809_1068
134.9
P10809_1085
132.7
P10809_1112
128.4
Naive CD8 T-cell nTPM: 130.3
Samples: 6
Max nTPM: 154.6
Min nTPM: 112.6
P10809_1016
139.3
P10809_1031
154.6
P10809_1050
112.6
P10809_1069
121.4
P10809_1087
125.5
P10809_1110
128.3
T-reg nTPM: 156.9
Samples: 6
Max nTPM: 221.0
Min nTPM: 88.0
P10809_1018
130.5
P10809_1037
221.0
P10809_1056
88.0
P10809_1075
163.0
P10809_1094
176.8
P10809_1106
162.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
319.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 247.6
Samples: 4
Max nTPM: 339.6
Min nTPM: 174.2
RHH5202_R3573
339.6
RHH5230_R3602
190.7
RHH5259_R3631
174.2
RHH5288_R3660
285.9
Effector memory CD8 T-cell nTPM: 223.3
Samples: 4
Max nTPM: 270.1
Min nTPM: 164.5
RHH5203_R3574
270.1
RHH5231_R3603
248.0
RHH5260_R3632
164.5
RHH5289_R3661
210.7
MAIT T-cell nTPM: 231.8
Samples: 4
Max nTPM: 280.6
Min nTPM: 175.7
RHH5233_R3605
222.6
RHH5205_R3576
175.7
RHH5262_R3634
248.4
RHH5297_R3663
280.6
Memory CD4 T-cell TFH nTPM: 290.2
Samples: 4
Max nTPM: 373.0
Min nTPM: 247.3
RHH5300_R3666
257.7
RHH5236_R3608
282.6
RHH5265_R3637
247.3
RHH5208_R3579
373.0
Memory CD4 T-cell Th1 nTPM: 252.0
Samples: 4
Max nTPM: 345.6
Min nTPM: 145.1
RHH5210_R3581
310.6
RHH5302_R3668
345.6
RHH5238_R3610
145.1
RHH5267_R3639
206.8
Memory CD4 T-cell Th1/Th17 nTPM: 262.7
Samples: 4
Max nTPM: 356.2
Min nTPM: 138.4
RHH5303_R3669
315.5
RHH5211_R3582
356.2
RHH5239_R3611
138.4
RHH5268_R3640
240.5
Memory CD4 T-cell Th17 nTPM: 214.0
Samples: 4
Max nTPM: 272.0
Min nTPM: 156.5
RHH5304_R3670
242.6
RHH5212_R3583
272.0
RHH5240_R3612
156.5
RHH5269_R3641
185.0
Memory CD4 T-cell Th2 nTPM: 295.8
Samples: 4
Max nTPM: 319.7
Min nTPM: 275.0
RHH5305_R3671
289.6
RHH5213_R3584
319.7
RHH5241_R3613
298.7
RHH5270_R3642
275.0
Naive CD4 T-cell nTPM: 319.0
Samples: 4
Max nTPM: 380.0
Min nTPM: 215.8
RHH5306_R3672
380.0
RHH5214_R3585
337.8
RHH5242_R3614
342.5
RHH5271_R3643
215.8
Naive CD8 T-cell nTPM: 300.5
Samples: 4
Max nTPM: 403.6
Min nTPM: 151.6
RHH5201_R3572
403.6
RHH5229_R3601
151.6
RHH5258_R3630
331.7
RHH5287_R3659
314.9
Non-Vd2 gdTCR nTPM: 196.1
Samples: 4
Max nTPM: 254.3
Min nTPM: 114.9
RHH5235_R3607
114.9
RHH5264_R3636
254.3
RHH5207_R3578
211.9
RHH5299_R3665
203.3
T-reg nTPM: 296.3
Samples: 4
Max nTPM: 366.0
Min nTPM: 190.5
RHH5301_R3667
352.8
RHH5237_R3609
366.0
RHH5266_R3638
190.5
RHH5209_R3580
275.8
Terminal effector memory CD4 T-cell nTPM: 191.7
Samples: 2
Max nTPM: 242.4
Min nTPM: 140.9
RHH5243_R3615
140.9
RHH5272_R3644
242.4
Terminal effector memory CD8 T-cell nTPM: 220.8
Samples: 4
Max nTPM: 256.7
Min nTPM: 167.1
RHH5232_R3604
208.8
RHH5204_R3575
250.4
RHH5261_R3633
167.1
RHH5296_R3662
256.7
Vd2 gdTCR nTPM: 235.7
Samples: 4
Max nTPM: 263.8
Min nTPM: 186.1
RHH5234_R3606
186.1
RHH5206_R3577
263.8
RHH5263_R3635
230.2
RHH5298_R3664
262.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.