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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
2108.3
nTPM
Monaco:
1938.8
nTPM
Schmiedel:
1448.5
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
2108.3
HPA sample
nTPM
gdT-cell nTPM: 1408.3
Samples: 6
Max nTPM: 1789.9
Min nTPM: 808.4
P10809_1007
1789.9
P10809_1022
1719.3
P10809_1041
1661.5
P10809_1060
808.4
P10809_1077
1139.4
P10809_1098
1331.0
MAIT T-cell nTPM: 1927.9
Samples: 6
Max nTPM: 2378.2
Min nTPM: 1541.2
P10809_1006
1813.0
P10809_1024
2378.2
P10809_1043
1959.5
P10809_1062
1541.2
P10809_1083
1583.7
P10809_1097
2291.6
Memory CD4 T-cell nTPM: 1827.6
Samples: 6
Max nTPM: 2690.7
Min nTPM: 943.7
P10809_1014
1710.5
P10809_1026
2318.6
P10809_1045
2690.7
P10809_1064
943.7
P10809_1086
1518.8
P10809_1113
1783.3
Memory CD8 T-cell nTPM: 1489.0
Samples: 5
Max nTPM: 2182.9
Min nTPM: 900.3
P10809_1012
1614.1
P10809_1027
1431.6
P10809_1046
2182.9
P10809_1065
900.3
P10809_1111
1316.2
Naive CD4 T-cell nTPM: 2108.3
Samples: 6
Max nTPM: 3098.4
Min nTPM: 1470.8
P10809_1015
1470.8
P10809_1030
2589.0
P10809_1049
3098.4
P10809_1068
1645.3
P10809_1085
1771.6
P10809_1112
2074.7
Naive CD8 T-cell nTPM: 1638.5
Samples: 6
Max nTPM: 1943.5
Min nTPM: 1288.2
P10809_1016
1514.0
P10809_1031
1933.8
P10809_1050
1840.5
P10809_1069
1288.2
P10809_1087
1310.9
P10809_1110
1943.5
T-reg nTPM: 1287.0
Samples: 6
Max nTPM: 1753.7
Min nTPM: 910.9
P10809_1018
910.9
P10809_1037
1508.1
P10809_1056
1151.7
P10809_1075
1121.6
P10809_1094
1753.7
P10809_1106
1275.8
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
1938.8
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 1479.1
Samples: 4
Max nTPM: 2261.2
Min nTPM: 1132.4
RHH5202_R3573
1132.4
RHH5230_R3602
1351.3
RHH5259_R3631
1171.4
RHH5288_R3660
2261.2
Effector memory CD8 T-cell nTPM: 706.6
Samples: 4
Max nTPM: 834.6
Min nTPM: 552.4
RHH5203_R3574
621.4
RHH5231_R3603
834.6
RHH5260_R3632
818.0
RHH5289_R3661
552.4
MAIT T-cell nTPM: 1417.1
Samples: 4
Max nTPM: 2198.1
Min nTPM: 957.9
RHH5233_R3605
1372.2
RHH5205_R3576
957.9
RHH5262_R3634
1140.1
RHH5297_R3663
2198.1
Memory CD4 T-cell TFH nTPM: 1673.3
Samples: 4
Max nTPM: 2290.4
Min nTPM: 1246.4
RHH5300_R3666
1904.5
RHH5236_R3608
2290.4
RHH5265_R3637
1246.4
RHH5208_R3579
1251.9
Memory CD4 T-cell Th1 nTPM: 1833.8
Samples: 4
Max nTPM: 3132.4
Min nTPM: 1241.7
RHH5210_R3581
1241.7
RHH5302_R3668
3132.4
RHH5238_R3610
1626.5
RHH5267_R3639
1334.6
Memory CD4 T-cell Th1/Th17 nTPM: 1617.5
Samples: 4
Max nTPM: 2469.3
Min nTPM: 1165.4
RHH5303_R3669
2469.3
RHH5211_R3582
1451.4
RHH5239_R3611
1165.4
RHH5268_R3640
1383.9
Memory CD4 T-cell Th17 nTPM: 1218.1
Samples: 4
Max nTPM: 1506.3
Min nTPM: 923.5
RHH5304_R3670
1506.3
RHH5212_R3583
1454.7
RHH5240_R3612
923.5
RHH5269_R3641
988.0
Memory CD4 T-cell Th2 nTPM: 1623.3
Samples: 4
Max nTPM: 2179.3
Min nTPM: 1049.6
RHH5305_R3671
1931.4
RHH5213_R3584
1333.0
RHH5241_R3613
2179.3
RHH5270_R3642
1049.6
Naive CD4 T-cell nTPM: 1938.8
Samples: 4
Max nTPM: 2551.2
Min nTPM: 1294.2
RHH5306_R3672
2310.6
RHH5214_R3585
2551.2
RHH5242_R3614
1599.3
RHH5271_R3643
1294.2
Naive CD8 T-cell nTPM: 1651.0
Samples: 4
Max nTPM: 2084.3
Min nTPM: 1405.6
RHH5201_R3572
1405.6
RHH5229_R3601
1461.9
RHH5258_R3630
2084.3
RHH5287_R3659
1652.0
Non-Vd2 gdTCR nTPM: 1052.8
Samples: 4
Max nTPM: 1606.8
Min nTPM: 775.7
RHH5235_R3607
775.7
RHH5264_R3636
1051.8
RHH5207_R3578
776.8
RHH5299_R3665
1606.8
T-reg nTPM: 1598.3
Samples: 4
Max nTPM: 2446.9
Min nTPM: 1063.4
RHH5301_R3667
2446.9
RHH5237_R3609
1656.0
RHH5266_R3638
1063.4
RHH5209_R3580
1226.8
Terminal effector memory CD4 T-cell nTPM: 1058.5
Samples: 2
Max nTPM: 1338.9
Min nTPM: 778.1
RHH5243_R3615
778.1
RHH5272_R3644
1338.9
Terminal effector memory CD8 T-cell nTPM: 1387.7
Samples: 4
Max nTPM: 2270.3
Min nTPM: 946.6
RHH5232_R3604
946.6
RHH5204_R3575
2270.3
RHH5261_R3633
972.7
RHH5296_R3662
1361.2
Vd2 gdTCR nTPM: 1845.1
Samples: 4
Max nTPM: 2862.7
Min nTPM: 1133.5
RHH5234_R3606
1246.3
RHH5206_R3577
2137.7
RHH5263_R3635
1133.5
RHH5298_R3664
2862.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.