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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
99.1
nTPM
Monaco:
123.8
nTPM
Schmiedel:
76.5
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
99.1
HPA sample
nTPM
gdT-cell nTPM: 80.7
Samples: 6
Max nTPM: 97.0
Min nTPM: 65.0
P10809_1007
97.0
P10809_1022
84.7
P10809_1041
72.4
P10809_1060
65.0
P10809_1077
77.5
P10809_1098
87.8
MAIT T-cell nTPM: 77.9
Samples: 6
Max nTPM: 91.3
Min nTPM: 65.5
P10809_1006
80.4
P10809_1024
65.5
P10809_1043
82.8
P10809_1062
74.3
P10809_1083
72.8
P10809_1097
91.3
Memory CD4 T-cell nTPM: 75.8
Samples: 6
Max nTPM: 86.3
Min nTPM: 55.3
P10809_1014
82.5
P10809_1026
86.3
P10809_1045
82.1
P10809_1064
80.4
P10809_1086
68.3
P10809_1113
55.3
Memory CD8 T-cell nTPM: 81.1
Samples: 5
Max nTPM: 95.5
Min nTPM: 69.1
P10809_1012
86.4
P10809_1027
76.5
P10809_1046
95.5
P10809_1065
77.8
P10809_1111
69.1
Naive CD4 T-cell nTPM: 63.6
Samples: 6
Max nTPM: 75.3
Min nTPM: 52.2
P10809_1015
66.9
P10809_1030
63.1
P10809_1049
75.3
P10809_1068
66.1
P10809_1085
57.8
P10809_1112
52.2
Naive CD8 T-cell nTPM: 78.2
Samples: 6
Max nTPM: 87.6
Min nTPM: 62.4
P10809_1016
85.2
P10809_1031
87.6
P10809_1050
79.9
P10809_1069
75.6
P10809_1087
78.4
P10809_1110
62.4
T-reg nTPM: 99.1
Samples: 6
Max nTPM: 163.7
Min nTPM: 66.8
P10809_1018
95.9
P10809_1037
78.9
P10809_1056
163.7
P10809_1075
66.8
P10809_1094
99.6
P10809_1106
89.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
123.8
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 83.6
Samples: 4
Max nTPM: 114.2
Min nTPM: 65.6
RHH5202_R3573
65.6
RHH5230_R3602
88.3
RHH5259_R3631
66.1
RHH5288_R3660
114.2
Effector memory CD8 T-cell nTPM: 89.0
Samples: 4
Max nTPM: 113.4
Min nTPM: 73.6
RHH5203_R3574
88.5
RHH5231_R3603
113.4
RHH5260_R3632
80.5
RHH5289_R3661
73.6
MAIT T-cell nTPM: 99.6
Samples: 4
Max nTPM: 150.9
Min nTPM: 50.5
RHH5233_R3605
107.7
RHH5205_R3576
50.5
RHH5262_R3634
89.3
RHH5297_R3663
150.9
Memory CD4 T-cell TFH nTPM: 103.8
Samples: 4
Max nTPM: 157.0
Min nTPM: 64.1
RHH5300_R3666
111.2
RHH5236_R3608
157.0
RHH5265_R3637
83.0
RHH5208_R3579
64.1
Memory CD4 T-cell Th1 nTPM: 99.3
Samples: 4
Max nTPM: 130.0
Min nTPM: 79.0
RHH5210_R3581
104.0
RHH5302_R3668
130.0
RHH5238_R3610
79.0
RHH5267_R3639
84.1
Memory CD4 T-cell Th1/Th17 nTPM: 88.7
Samples: 4
Max nTPM: 117.4
Min nTPM: 40.5
RHH5303_R3669
117.4
RHH5211_R3582
109.8
RHH5239_R3611
40.5
RHH5268_R3640
86.9
Memory CD4 T-cell Th17 nTPM: 74.7
Samples: 4
Max nTPM: 115.1
Min nTPM: 42.8
RHH5304_R3670
73.7
RHH5212_R3583
115.1
RHH5240_R3612
42.8
RHH5269_R3641
67.0
Memory CD4 T-cell Th2 nTPM: 84.0
Samples: 4
Max nTPM: 90.7
Min nTPM: 76.6
RHH5305_R3671
90.7
RHH5213_R3584
87.9
RHH5241_R3613
80.9
RHH5270_R3642
76.6
Naive CD4 T-cell nTPM: 85.5
Samples: 4
Max nTPM: 134.2
Min nTPM: 51.6
RHH5306_R3672
103.5
RHH5214_R3585
134.2
RHH5242_R3614
51.6
RHH5271_R3643
52.6
Naive CD8 T-cell nTPM: 74.9
Samples: 4
Max nTPM: 105.3
Min nTPM: 56.3
RHH5201_R3572
56.3
RHH5229_R3601
57.8
RHH5258_R3630
105.3
RHH5287_R3659
80.2
Non-Vd2 gdTCR nTPM: 119.9
Samples: 4
Max nTPM: 173.8
Min nTPM: 74.0
RHH5235_R3607
74.0
RHH5264_R3636
140.7
RHH5207_R3578
91.0
RHH5299_R3665
173.8
T-reg nTPM: 107.4
Samples: 4
Max nTPM: 167.7
Min nTPM: 64.1
RHH5301_R3667
130.6
RHH5237_R3609
167.7
RHH5266_R3638
64.1
RHH5209_R3580
67.1
Terminal effector memory CD4 T-cell nTPM: 77.0
Samples: 2
Max nTPM: 98.4
Min nTPM: 55.6
RHH5243_R3615
55.6
RHH5272_R3644
98.4
Terminal effector memory CD8 T-cell nTPM: 118.8
Samples: 4
Max nTPM: 165.8
Min nTPM: 85.4
RHH5232_R3604
98.4
RHH5204_R3575
165.8
RHH5261_R3633
85.4
RHH5296_R3662
125.4
Vd2 gdTCR nTPM: 123.8
Samples: 4
Max nTPM: 162.1
Min nTPM: 72.7
RHH5234_R3606
104.4
RHH5206_R3577
162.1
RHH5263_R3635
72.7
RHH5298_R3664
155.9
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
